Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TIMD4Q96H15 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMD4Q96H15 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMD4Q96H15 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
TIMD4Q96H15 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMD4Q96H15 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TIMD4Q96H15 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMD4Q96H15 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TIMD4Q96H15 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TIMD4Q96H15 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TIMD4Q96H15 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.66■□□□□ 0.42
TIMD4Q96H15 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.66■□□□□ 0.42
TIMD4Q96H15 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TIMD4Q96H15 AC005181.1-201ENST00000604782 1256 ntBASIC17.66■□□□□ 0.42
TIMD4Q96H15 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TIMD4Q96H15 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TIMD4Q96H15 FAM99A-202ENST00000538190 1989 ntBASIC17.66■□□□□ 0.42
TIMD4Q96H15 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMD4Q96H15 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMD4Q96H15 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMD4Q96H15 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TIMD4Q96H15 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMD4Q96H15 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.65■□□□□ 0.42
TIMD4Q96H15 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMD4Q96H15 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TIMD4Q96H15 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMD4Q96H15 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TIMD4Q96H15 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.65■□□□□ 0.42
TIMD4Q96H15 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TIMD4Q96H15 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TIMD4Q96H15 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
TIMD4Q96H15 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.65■□□□□ 0.42
TIMD4Q96H15 TERF1P5-201ENST00000477545 1207 ntBASIC17.65■□□□□ 0.42
TIMD4Q96H15 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.65■□□□□ 0.42
TIMD4Q96H15 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.65■□□□□ 0.42
TIMD4Q96H15 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.65■□□□□ 0.42
TIMD4Q96H15 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMD4Q96H15 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMD4Q96H15 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.65■□□□□ 0.42
TIMD4Q96H15 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMD4Q96H15 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TIMD4Q96H15 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMD4Q96H15 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.65■□□□□ 0.42
TIMD4Q96H15 AC233723.2-201ENST00000623798 2106 ntBASIC17.65■□□□□ 0.42
TIMD4Q96H15 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TIMD4Q96H15 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TIMD4Q96H15 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
TIMD4Q96H15 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TIMD4Q96H15 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMD4Q96H15 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TIMD4Q96H15 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMD4Q96H15 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.64■□□□□ 0.41
TIMD4Q96H15 HLA-L-209ENST00000420110 1011 ntBASIC17.64■□□□□ 0.41
TIMD4Q96H15 CROCCP5-201ENST00000436658 830 ntBASIC17.64■□□□□ 0.41
TIMD4Q96H15 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.64■□□□□ 0.41
TIMD4Q96H15 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.64■□□□□ 0.41
TIMD4Q96H15 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.64■□□□□ 0.41
TIMD4Q96H15 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TIMD4Q96H15 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TIMD4Q96H15 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMD4Q96H15 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMD4Q96H15 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.64■□□□□ 0.41
TIMD4Q96H15 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMD4Q96H15 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMD4Q96H15 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMD4Q96H15 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.64■□□□□ 0.41
TIMD4Q96H15 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.63■□□□□ 0.41
TIMD4Q96H15 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TIMD4Q96H15 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TIMD4Q96H15 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TIMD4Q96H15 GUSBP5-202ENST00000510805 1989 ntBASIC17.63■□□□□ 0.41
TIMD4Q96H15 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TIMD4Q96H15 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TIMD4Q96H15 GPX1P1-201ENST00000388829 606 ntBASIC17.63■□□□□ 0.41
TIMD4Q96H15 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.63■□□□□ 0.41
TIMD4Q96H15 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TIMD4Q96H15 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TIMD4Q96H15 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.63■□□□□ 0.41
TIMD4Q96H15 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TIMD4Q96H15 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.63■□□□□ 0.41
TIMD4Q96H15 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TIMD4Q96H15 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.63■□□□□ 0.41
TIMD4Q96H15 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.63■□□□□ 0.41
TIMD4Q96H15 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.63■□□□□ 0.41
TIMD4Q96H15 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TIMD4Q96H15 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.62■□□□□ 0.41
TIMD4Q96H15 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TIMD4Q96H15 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.62■□□□□ 0.41
TIMD4Q96H15 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TIMD4Q96H15 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TIMD4Q96H15 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TIMD4Q96H15 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.62■□□□□ 0.41
TIMD4Q96H15 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.62■□□□□ 0.41
TIMD4Q96H15 AL121832.2-201ENST00000610979 668 ntBASIC17.62■□□□□ 0.41
TIMD4Q96H15 AL109923.1-201ENST00000618799 583 ntBASIC17.62■□□□□ 0.41
TIMD4Q96H15 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TIMD4Q96H15 AC008694.1-202ENST00000636953 945 ntBASIC17.62■□□□□ 0.41
TIMD4Q96H15 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.62■□□□□ 0.41
TIMD4Q96H15 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TIMD4Q96H15 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms