Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
IFT43Q96FT9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.59■■□□□ 1.05
IFT43Q96FT9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.59■■□□□ 1.05
IFT43Q96FT9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.59■■□□□ 1.05
IFT43Q96FT9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
IFT43Q96FT9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
IFT43Q96FT9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
IFT43Q96FT9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
IFT43Q96FT9 AC010542.4-201ENST00000563151 1910 ntBASIC21.59■■□□□ 1.05
IFT43Q96FT9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
IFT43Q96FT9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
IFT43Q96FT9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.59■■□□□ 1.05
IFT43Q96FT9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
IFT43Q96FT9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
IFT43Q96FT9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.58■■□□□ 1.05
IFT43Q96FT9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.58■■□□□ 1.05
IFT43Q96FT9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
IFT43Q96FT9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
IFT43Q96FT9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
IFT43Q96FT9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
IFT43Q96FT9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
IFT43Q96FT9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.58■■□□□ 1.05
IFT43Q96FT9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
IFT43Q96FT9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
IFT43Q96FT9 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.58■■□□□ 1.04
IFT43Q96FT9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
IFT43Q96FT9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
IFT43Q96FT9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
IFT43Q96FT9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
IFT43Q96FT9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IFT43Q96FT9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
IFT43Q96FT9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
IFT43Q96FT9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.57■■□□□ 1.04
IFT43Q96FT9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.57■■□□□ 1.04
IFT43Q96FT9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
IFT43Q96FT9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.57■■□□□ 1.04
IFT43Q96FT9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.57■■□□□ 1.04
IFT43Q96FT9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
IFT43Q96FT9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
IFT43Q96FT9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IFT43Q96FT9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
IFT43Q96FT9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IFT43Q96FT9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IFT43Q96FT9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.57■■□□□ 1.04
IFT43Q96FT9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IFT43Q96FT9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.57■■□□□ 1.04
IFT43Q96FT9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.57■■□□□ 1.04
IFT43Q96FT9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IFT43Q96FT9 AC005224.4-201ENST00000583262 1652 ntBASIC21.56■■□□□ 1.04
IFT43Q96FT9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
IFT43Q96FT9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IFT43Q96FT9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.56■■□□□ 1.04
IFT43Q96FT9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.56■■□□□ 1.04
IFT43Q96FT9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IFT43Q96FT9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.56■■□□□ 1.04
IFT43Q96FT9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.56■■□□□ 1.04
IFT43Q96FT9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.56■■□□□ 1.04
IFT43Q96FT9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
IFT43Q96FT9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IFT43Q96FT9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
IFT43Q96FT9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
IFT43Q96FT9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.56■■□□□ 1.04
IFT43Q96FT9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
IFT43Q96FT9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
IFT43Q96FT9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
IFT43Q96FT9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.55■■□□□ 1.04
IFT43Q96FT9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
IFT43Q96FT9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
IFT43Q96FT9 AC004911.1-201ENST00000416316 871 ntBASIC21.55■■□□□ 1.04
IFT43Q96FT9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.55■■□□□ 1.04
IFT43Q96FT9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
IFT43Q96FT9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
IFT43Q96FT9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
IFT43Q96FT9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.55■■□□□ 1.04
IFT43Q96FT9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.55■■□□□ 1.04
IFT43Q96FT9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
IFT43Q96FT9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.54■■□□□ 1.04
IFT43Q96FT9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
IFT43Q96FT9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
IFT43Q96FT9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.54■■□□□ 1.04
IFT43Q96FT9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.54■■□□□ 1.04
IFT43Q96FT9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.54■■□□□ 1.04
IFT43Q96FT9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.54■■□□□ 1.04
IFT43Q96FT9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.54■■□□□ 1.04
IFT43Q96FT9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
IFT43Q96FT9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.54■■□□□ 1.04
IFT43Q96FT9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.54■■□□□ 1.04
IFT43Q96FT9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.54■■□□□ 1.04
IFT43Q96FT9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
IFT43Q96FT9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
IFT43Q96FT9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
IFT43Q96FT9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
IFT43Q96FT9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
IFT43Q96FT9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
IFT43Q96FT9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
IFT43Q96FT9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
IFT43Q96FT9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
IFT43Q96FT9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
IFT43Q96FT9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
IFT43Q96FT9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms