Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NEIL1Q96FI4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NEIL1Q96FI4 AL137060.1-201ENST00000618151 2648 ntBASIC17.7■□□□□ 0.42
NEIL1Q96FI4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.7■□□□□ 0.42
NEIL1Q96FI4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NEIL1Q96FI4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NEIL1Q96FI4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.7■□□□□ 0.42
NEIL1Q96FI4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NEIL1Q96FI4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEIL1Q96FI4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEIL1Q96FI4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEIL1Q96FI4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEIL1Q96FI4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEIL1Q96FI4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEIL1Q96FI4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEIL1Q96FI4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEIL1Q96FI4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NEIL1Q96FI4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.69■□□□□ 0.42
NEIL1Q96FI4 KRT18P11-201ENST00000435214 1283 ntBASIC17.69■□□□□ 0.42
NEIL1Q96FI4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEIL1Q96FI4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.69■□□□□ 0.42
NEIL1Q96FI4 AC092437.1-201ENST00000624794 1048 ntBASIC17.69■□□□□ 0.42
NEIL1Q96FI4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NEIL1Q96FI4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NEIL1Q96FI4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEIL1Q96FI4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEIL1Q96FI4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.69■□□□□ 0.42
NEIL1Q96FI4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NEIL1Q96FI4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
NEIL1Q96FI4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.69■□□□□ 0.42
NEIL1Q96FI4 SLC25A24-204ENST00000569674 2357 ntBASIC17.68■□□□□ 0.42
NEIL1Q96FI4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEIL1Q96FI4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEIL1Q96FI4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEIL1Q96FI4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEIL1Q96FI4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEIL1Q96FI4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.68■□□□□ 0.42
NEIL1Q96FI4 AC004911.1-201ENST00000416316 871 ntBASIC17.68■□□□□ 0.42
NEIL1Q96FI4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.68■□□□□ 0.42
NEIL1Q96FI4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NEIL1Q96FI4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.68■□□□□ 0.42
NEIL1Q96FI4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.68■□□□□ 0.42
NEIL1Q96FI4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEIL1Q96FI4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEIL1Q96FI4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.68■□□□□ 0.42
NEIL1Q96FI4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEIL1Q96FI4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEIL1Q96FI4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
NEIL1Q96FI4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
NEIL1Q96FI4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NEIL1Q96FI4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEIL1Q96FI4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.67■□□□□ 0.42
NEIL1Q96FI4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NEIL1Q96FI4 AC006015.1-201ENST00000429970 570 ntBASIC17.67■□□□□ 0.42
NEIL1Q96FI4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NEIL1Q96FI4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEIL1Q96FI4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.67■□□□□ 0.42
NEIL1Q96FI4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.67■□□□□ 0.42
NEIL1Q96FI4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.67■□□□□ 0.42
NEIL1Q96FI4 AC138907.5-202ENST00000569484 235 ntBASIC17.67■□□□□ 0.42
NEIL1Q96FI4 AP001160.3-201ENST00000601484 763 ntBASIC17.67■□□□□ 0.42
NEIL1Q96FI4 AC053503.5-201ENST00000601508 636 ntBASIC17.67■□□□□ 0.42
NEIL1Q96FI4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.67■□□□□ 0.42
NEIL1Q96FI4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEIL1Q96FI4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.67■□□□□ 0.42
NEIL1Q96FI4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NEIL1Q96FI4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.67■□□□□ 0.42
NEIL1Q96FI4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NEIL1Q96FI4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEIL1Q96FI4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NEIL1Q96FI4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 EEF1DP3-203ENST00000566025 782 ntBASIC17.66■□□□□ 0.42
NEIL1Q96FI4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.66■□□□□ 0.42
NEIL1Q96FI4 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.66■□□□□ 0.42
NEIL1Q96FI4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEIL1Q96FI4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEIL1Q96FI4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEIL1Q96FI4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEIL1Q96FI4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NEIL1Q96FI4 AC010141.2-201ENST00000452426 721 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms