Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.11■□□□□ 0.97
ECHDC3Q96DC8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
ECHDC3Q96DC8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
ECHDC3Q96DC8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.11■□□□□ 0.97
ECHDC3Q96DC8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ECHDC3Q96DC8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.11■□□□□ 0.97
ECHDC3Q96DC8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ECHDC3Q96DC8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.11■□□□□ 0.97
ECHDC3Q96DC8 AC010536.3-201ENST00000620306 533 ntBASIC21.11■□□□□ 0.97
ECHDC3Q96DC8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ECHDC3Q96DC8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ECHDC3Q96DC8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.11■□□□□ 0.97
ECHDC3Q96DC8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
ECHDC3Q96DC8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.11■□□□□ 0.97
ECHDC3Q96DC8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ECHDC3Q96DC8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ECHDC3Q96DC8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ECHDC3Q96DC8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC3Q96DC8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC3Q96DC8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC3Q96DC8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC3Q96DC8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC3Q96DC8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC3Q96DC8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC3Q96DC8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.1■□□□□ 0.97
ECHDC3Q96DC8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ECHDC3Q96DC8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
ECHDC3Q96DC8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
ECHDC3Q96DC8 FBXW4P1-201ENST00000426721 2239 ntBASIC21.1■□□□□ 0.97
ECHDC3Q96DC8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
ECHDC3Q96DC8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.1■□□□□ 0.97
ECHDC3Q96DC8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC3Q96DC8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC3Q96DC8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC3Q96DC8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC3Q96DC8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC3Q96DC8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.08■□□□□ 0.97
ECHDC3Q96DC8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.08■□□□□ 0.97
ECHDC3Q96DC8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ECHDC3Q96DC8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.08■□□□□ 0.97
ECHDC3Q96DC8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ECHDC3Q96DC8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ECHDC3Q96DC8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
ECHDC3Q96DC8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ECHDC3Q96DC8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.08■□□□□ 0.97
ECHDC3Q96DC8 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.08■□□□□ 0.97
ECHDC3Q96DC8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.08■□□□□ 0.96
ECHDC3Q96DC8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ECHDC3Q96DC8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.08■□□□□ 0.96
ECHDC3Q96DC8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ECHDC3Q96DC8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ECHDC3Q96DC8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ECHDC3Q96DC8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ECHDC3Q96DC8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ECHDC3Q96DC8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.07■□□□□ 0.96
ECHDC3Q96DC8 RBM17P2-201ENST00000616397 1405 ntBASIC21.07■□□□□ 0.96
ECHDC3Q96DC8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ECHDC3Q96DC8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.07■□□□□ 0.96
ECHDC3Q96DC8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ECHDC3Q96DC8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.07■□□□□ 0.96
ECHDC3Q96DC8 CNN2P6-201ENST00000439038 900 ntBASIC21.07■□□□□ 0.96
ECHDC3Q96DC8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.07■□□□□ 0.96
ECHDC3Q96DC8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.07■□□□□ 0.96
ECHDC3Q96DC8 AC243732.1-201ENST00000612648 864 ntBASIC21.07■□□□□ 0.96
ECHDC3Q96DC8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ECHDC3Q96DC8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ECHDC3Q96DC8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
ECHDC3Q96DC8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
ECHDC3Q96DC8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ECHDC3Q96DC8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ECHDC3Q96DC8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ECHDC3Q96DC8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ECHDC3Q96DC8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ECHDC3Q96DC8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ECHDC3Q96DC8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ECHDC3Q96DC8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ECHDC3Q96DC8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.06■□□□□ 0.96
ECHDC3Q96DC8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.06■□□□□ 0.96
ECHDC3Q96DC8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms