Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CPNE4Q96A23 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CPNE4Q96A23 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE4Q96A23 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE4Q96A23 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE4Q96A23 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE4Q96A23 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE4Q96A23 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE4Q96A23 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE4Q96A23 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.85■□□□□ 0.61
CPNE4Q96A23 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE4Q96A23 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE4Q96A23 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CPNE4Q96A23 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE4Q96A23 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.85■□□□□ 0.61
CPNE4Q96A23 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CPNE4Q96A23 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.85■□□□□ 0.61
CPNE4Q96A23 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.85■□□□□ 0.61
CPNE4Q96A23 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE4Q96A23 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE4Q96A23 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE4Q96A23 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE4Q96A23 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE4Q96A23 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE4Q96A23 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE4Q96A23 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.84■□□□□ 0.61
CPNE4Q96A23 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.84■□□□□ 0.61
CPNE4Q96A23 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.84■□□□□ 0.61
CPNE4Q96A23 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE4Q96A23 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.84■□□□□ 0.61
CPNE4Q96A23 UBE2DNL-204ENST00000602536 740 ntBASIC18.84■□□□□ 0.61
CPNE4Q96A23 AC092437.1-201ENST00000624794 1048 ntBASIC18.84■□□□□ 0.61
CPNE4Q96A23 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CPNE4Q96A23 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE4Q96A23 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE4Q96A23 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.84■□□□□ 0.61
CPNE4Q96A23 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.84■□□□□ 0.61
CPNE4Q96A23 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.84■□□□□ 0.61
CPNE4Q96A23 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CPNE4Q96A23 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE4Q96A23 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE4Q96A23 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CPNE4Q96A23 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CPNE4Q96A23 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CPNE4Q96A23 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CPNE4Q96A23 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE4Q96A23 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE4Q96A23 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE4Q96A23 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.83■□□□□ 0.6
CPNE4Q96A23 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.83■□□□□ 0.6
CPNE4Q96A23 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.83■□□□□ 0.6
CPNE4Q96A23 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.83■□□□□ 0.6
CPNE4Q96A23 SLC7A5P1-201ENST00000568957 537 ntBASIC18.83■□□□□ 0.6
CPNE4Q96A23 BID-214ENST00000617586 542 ntTSL 5 BASIC18.83■□□□□ 0.6
CPNE4Q96A23 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.83■□□□□ 0.6
CPNE4Q96A23 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.83■□□□□ 0.6
CPNE4Q96A23 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.83■□□□□ 0.6
CPNE4Q96A23 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE4Q96A23 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE4Q96A23 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE4Q96A23 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE4Q96A23 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE4Q96A23 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE4Q96A23 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CPNE4Q96A23 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE4Q96A23 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.83■□□□□ 0.6
CPNE4Q96A23 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.83■□□□□ 0.6
CPNE4Q96A23 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE4Q96A23 KRT16P2-201ENST00000414673 1423 ntBASIC18.83■□□□□ 0.6
CPNE4Q96A23 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE4Q96A23 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE4Q96A23 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.82■□□□□ 0.6
CPNE4Q96A23 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE4Q96A23 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE4Q96A23 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE4Q96A23 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE4Q96A23 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE4Q96A23 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.82■□□□□ 0.6
CPNE4Q96A23 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE4Q96A23 MYCNOS-205ENST00000641950 531 ntBASIC18.82■□□□□ 0.6
CPNE4Q96A23 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CPNE4Q96A23 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE4Q96A23 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE4Q96A23 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE4Q96A23 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE4Q96A23 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CPNE4Q96A23 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CPNE4Q96A23 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.81■□□□□ 0.6
CPNE4Q96A23 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE4Q96A23 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.81■□□□□ 0.6
CPNE4Q96A23 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.81■□□□□ 0.6
CPNE4Q96A23 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE4Q96A23 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE4Q96A23 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CPNE4Q96A23 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CPNE4Q96A23 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.81■□□□□ 0.6
CPNE4Q96A23 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.81■□□□□ 0.6
CPNE4Q96A23 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE4Q96A23 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE4Q96A23 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms