Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
ARHGEF40Q8TER5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
ARHGEF40Q8TER5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC31.66■■■□□ 2.66
ARHGEF40Q8TER5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC31.66■■■□□ 2.66
ARHGEF40Q8TER5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
ARHGEF40Q8TER5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC31.66■■■□□ 2.66
ARHGEF40Q8TER5 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
ARHGEF40Q8TER5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC31.66■■■□□ 2.66
ARHGEF40Q8TER5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
ARHGEF40Q8TER5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
ARHGEF40Q8TER5 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ARHGEF40Q8TER5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
ARHGEF40Q8TER5 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ARHGEF40Q8TER5 AC091799.1-201ENST00000422823 811 ntBASIC31.65■■■□□ 2.66
ARHGEF40Q8TER5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC31.65■■■□□ 2.66
ARHGEF40Q8TER5 CD177P1-201ENST00000606252 935 ntBASIC31.65■■■□□ 2.66
ARHGEF40Q8TER5 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ARHGEF40Q8TER5 AC061975.6-201ENST00000579045 1553 ntBASIC31.65■■■□□ 2.66
ARHGEF40Q8TER5 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC31.65■■■□□ 2.66
ARHGEF40Q8TER5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ARHGEF40Q8TER5 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
ARHGEF40Q8TER5 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
ARHGEF40Q8TER5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
ARHGEF40Q8TER5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
ARHGEF40Q8TER5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC31.65■■■□□ 2.66
ARHGEF40Q8TER5 TSPY15P-201ENST00000457163 923 ntBASIC31.65■■■□□ 2.66
ARHGEF40Q8TER5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
ARHGEF40Q8TER5 AC124016.1-201ENST00000609552 612 ntBASIC31.65■■■□□ 2.66
ARHGEF40Q8TER5 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
ARHGEF40Q8TER5 AC113410.3-201ENST00000623366 203 ntBASIC31.65■■■□□ 2.66
ARHGEF40Q8TER5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
ARHGEF40Q8TER5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC31.64■■■□□ 2.66
ARHGEF40Q8TER5 KRT17P2-201ENST00000300992 1314 ntBASIC31.64■■■□□ 2.66
ARHGEF40Q8TER5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
ARHGEF40Q8TER5 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
ARHGEF40Q8TER5 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC31.64■■■□□ 2.66
ARHGEF40Q8TER5 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
ARHGEF40Q8TER5 TMPOP1-202ENST00000424642 1267 ntBASIC31.64■■■□□ 2.66
ARHGEF40Q8TER5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC31.64■■■□□ 2.66
ARHGEF40Q8TER5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC31.64■■■□□ 2.66
ARHGEF40Q8TER5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC31.64■■■□□ 2.65
ARHGEF40Q8TER5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
ARHGEF40Q8TER5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
ARHGEF40Q8TER5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
ARHGEF40Q8TER5 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
ARHGEF40Q8TER5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
ARHGEF40Q8TER5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
ARHGEF40Q8TER5 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
ARHGEF40Q8TER5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
ARHGEF40Q8TER5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
ARHGEF40Q8TER5 AC133681.1-201ENST00000465482 601 ntBASIC31.62■■■□□ 2.65
ARHGEF40Q8TER5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
ARHGEF40Q8TER5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC31.62■■■□□ 2.65
ARHGEF40Q8TER5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
ARHGEF40Q8TER5 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
ARHGEF40Q8TER5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC31.62■■■□□ 2.65
ARHGEF40Q8TER5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC31.61■■■□□ 2.65
ARHGEF40Q8TER5 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC31.61■■■□□ 2.65
ARHGEF40Q8TER5 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC31.61■■■□□ 2.65
ARHGEF40Q8TER5 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
ARHGEF40Q8TER5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
ARHGEF40Q8TER5 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ARHGEF40Q8TER5 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ARHGEF40Q8TER5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
ARHGEF40Q8TER5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC31.61■■■□□ 2.65
ARHGEF40Q8TER5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
ARHGEF40Q8TER5 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
ARHGEF40Q8TER5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ARHGEF40Q8TER5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ARHGEF40Q8TER5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC31.6■■■□□ 2.65
ARHGEF40Q8TER5 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC31.6■■■□□ 2.65
ARHGEF40Q8TER5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ARHGEF40Q8TER5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC31.59■■■□□ 2.65
ARHGEF40Q8TER5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC31.59■■■□□ 2.65
ARHGEF40Q8TER5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
ARHGEF40Q8TER5 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
ARHGEF40Q8TER5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ARHGEF40Q8TER5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC31.59■■■□□ 2.65
ARHGEF40Q8TER5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
ARHGEF40Q8TER5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ARHGEF40Q8TER5 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC31.59■■■□□ 2.65
ARHGEF40Q8TER5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
ARHGEF40Q8TER5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ARHGEF40Q8TER5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
ARHGEF40Q8TER5 MCRIP2P1-201ENST00000394346 511 ntBASIC31.59■■■□□ 2.65
ARHGEF40Q8TER5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
ARHGEF40Q8TER5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
ARHGEF40Q8TER5 C2orf69P4-201ENST00000565394 541 ntBASIC31.59■■■□□ 2.65
ARHGEF40Q8TER5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC31.59■■■□□ 2.65
ARHGEF40Q8TER5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
ARHGEF40Q8TER5 AC004812.2-201ENST00000611079 2094 ntBASIC31.58■■■□□ 2.65
ARHGEF40Q8TER5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
ARHGEF40Q8TER5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC31.58■■■□□ 2.65
ARHGEF40Q8TER5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
ARHGEF40Q8TER5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC31.58■■■□□ 2.65
ARHGEF40Q8TER5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC31.58■■■□□ 2.65
ARHGEF40Q8TER5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
ARHGEF40Q8TER5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
ARHGEF40Q8TER5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
ARHGEF40Q8TER5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC31.57■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms