Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SHKBP1Q8TBC3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SHKBP1Q8TBC3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.12■■□□□ 1.13
SHKBP1Q8TBC3 AC008175.2-201ENST00000612840 297 ntBASIC22.12■■□□□ 1.13
SHKBP1Q8TBC3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.12■■□□□ 1.13
SHKBP1Q8TBC3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SHKBP1Q8TBC3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.12■■□□□ 1.13
SHKBP1Q8TBC3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SHKBP1Q8TBC3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.12■■□□□ 1.13
SHKBP1Q8TBC3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SHKBP1Q8TBC3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SHKBP1Q8TBC3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SHKBP1Q8TBC3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SHKBP1Q8TBC3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SHKBP1Q8TBC3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SHKBP1Q8TBC3 AC073210.2-201ENST00000430369 194 ntBASIC22.11■■□□□ 1.13
SHKBP1Q8TBC3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.11■■□□□ 1.13
SHKBP1Q8TBC3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.11■■□□□ 1.13
SHKBP1Q8TBC3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.11■■□□□ 1.13
SHKBP1Q8TBC3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.11■■□□□ 1.13
SHKBP1Q8TBC3 TMEM191A-211ENST00000637163 1067 ntBASIC22.11■■□□□ 1.13
SHKBP1Q8TBC3 AC133041.1-202ENST00000642053 222 ntBASIC22.11■■□□□ 1.13
SHKBP1Q8TBC3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.11■■□□□ 1.13
SHKBP1Q8TBC3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
SHKBP1Q8TBC3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
SHKBP1Q8TBC3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHKBP1Q8TBC3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.1■■□□□ 1.13
SHKBP1Q8TBC3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHKBP1Q8TBC3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHKBP1Q8TBC3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHKBP1Q8TBC3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHKBP1Q8TBC3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.1■■□□□ 1.13
SHKBP1Q8TBC3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.1■■□□□ 1.13
SHKBP1Q8TBC3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHKBP1Q8TBC3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHKBP1Q8TBC3 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.1■■□□□ 1.13
SHKBP1Q8TBC3 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.1■■□□□ 1.13
SHKBP1Q8TBC3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHKBP1Q8TBC3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHKBP1Q8TBC3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SHKBP1Q8TBC3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.1■■□□□ 1.13
SHKBP1Q8TBC3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHKBP1Q8TBC3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHKBP1Q8TBC3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
SHKBP1Q8TBC3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
SHKBP1Q8TBC3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SHKBP1Q8TBC3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SHKBP1Q8TBC3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SHKBP1Q8TBC3 POU5F1P4-201ENST00000413175 1085 ntBASIC22.09■■□□□ 1.13
SHKBP1Q8TBC3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.09■■□□□ 1.13
SHKBP1Q8TBC3 AC120498.10-201ENST00000621827 505 ntBASIC22.09■■□□□ 1.13
SHKBP1Q8TBC3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.09■■□□□ 1.13
SHKBP1Q8TBC3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
SHKBP1Q8TBC3 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.09■■□□□ 1.13
SHKBP1Q8TBC3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SHKBP1Q8TBC3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
SHKBP1Q8TBC3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SHKBP1Q8TBC3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SHKBP1Q8TBC3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SHKBP1Q8TBC3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
SHKBP1Q8TBC3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
SHKBP1Q8TBC3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SHKBP1Q8TBC3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.08■■□□□ 1.13
SHKBP1Q8TBC3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
SHKBP1Q8TBC3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SHKBP1Q8TBC3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SHKBP1Q8TBC3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.08■■□□□ 1.13
SHKBP1Q8TBC3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SHKBP1Q8TBC3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC22.08■■□□□ 1.13
SHKBP1Q8TBC3 MIR4651-201ENST00000582622 73 ntBASIC22.08■■□□□ 1.13
SHKBP1Q8TBC3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.08■■□□□ 1.13
SHKBP1Q8TBC3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.08■■□□□ 1.13
SHKBP1Q8TBC3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SHKBP1Q8TBC3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SHKBP1Q8TBC3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
SHKBP1Q8TBC3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 AC093787.1-201ENST00000450396 207 ntBASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 AC016405.3-201ENST00000607710 860 ntBASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 OR10C1-204ENST00000622521 1039 ntBASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 AL024507.2-201ENST00000606070 2574 ntBASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SHKBP1Q8TBC3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
SHKBP1Q8TBC3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms