Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.39■□□□□ 0.53
CPEB3Q8NE35 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CPEB3Q8NE35 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CPEB3Q8NE35 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.39■□□□□ 0.53
CPEB3Q8NE35 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.39■□□□□ 0.53
CPEB3Q8NE35 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPEB3Q8NE35 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPEB3Q8NE35 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.39■□□□□ 0.53
CPEB3Q8NE35 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.39■□□□□ 0.53
CPEB3Q8NE35 AC053503.5-201ENST00000601508 636 ntBASIC18.39■□□□□ 0.53
CPEB3Q8NE35 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CPEB3Q8NE35 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CPEB3Q8NE35 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CPEB3Q8NE35 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.39■□□□□ 0.53
CPEB3Q8NE35 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPEB3Q8NE35 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPEB3Q8NE35 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.39■□□□□ 0.53
CPEB3Q8NE35 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPEB3Q8NE35 CLDN5-201ENST00000403084 2357 ntBASIC18.39■□□□□ 0.53
CPEB3Q8NE35 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.39■□□□□ 0.53
CPEB3Q8NE35 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
CPEB3Q8NE35 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
CPEB3Q8NE35 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.38■□□□□ 0.53
CPEB3Q8NE35 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.38■□□□□ 0.53
CPEB3Q8NE35 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.38■□□□□ 0.53
CPEB3Q8NE35 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPEB3Q8NE35 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.38■□□□□ 0.53
CPEB3Q8NE35 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.38■□□□□ 0.53
CPEB3Q8NE35 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPEB3Q8NE35 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.38■□□□□ 0.53
CPEB3Q8NE35 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.38■□□□□ 0.53
CPEB3Q8NE35 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.38■□□□□ 0.53
CPEB3Q8NE35 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPEB3Q8NE35 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPEB3Q8NE35 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPEB3Q8NE35 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.38■□□□□ 0.53
CPEB3Q8NE35 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPEB3Q8NE35 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPEB3Q8NE35 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPEB3Q8NE35 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.37■□□□□ 0.53
CPEB3Q8NE35 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPEB3Q8NE35 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPEB3Q8NE35 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CPEB3Q8NE35 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPEB3Q8NE35 AC034268.1-201ENST00000441047 882 ntBASIC18.37■□□□□ 0.53
CPEB3Q8NE35 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.37■□□□□ 0.53
CPEB3Q8NE35 AP004607.4-201ENST00000530158 1459 ntBASIC18.37■□□□□ 0.53
CPEB3Q8NE35 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPEB3Q8NE35 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPEB3Q8NE35 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CPEB3Q8NE35 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.37■□□□□ 0.53
CPEB3Q8NE35 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPEB3Q8NE35 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.37■□□□□ 0.53
CPEB3Q8NE35 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CPEB3Q8NE35 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPEB3Q8NE35 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.37■□□□□ 0.53
CPEB3Q8NE35 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPEB3Q8NE35 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPEB3Q8NE35 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CPEB3Q8NE35 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPEB3Q8NE35 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPEB3Q8NE35 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.36■□□□□ 0.53
CPEB3Q8NE35 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.36■□□□□ 0.53
CPEB3Q8NE35 KRT18P61-201ENST00000585825 1298 ntBASIC18.36■□□□□ 0.53
CPEB3Q8NE35 AC004854.2-201ENST00000608450 1441 ntBASIC18.36■□□□□ 0.53
CPEB3Q8NE35 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPEB3Q8NE35 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.36■□□□□ 0.53
CPEB3Q8NE35 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.35■□□□□ 0.53
CPEB3Q8NE35 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CPEB3Q8NE35 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPEB3Q8NE35 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CPEB3Q8NE35 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
CPEB3Q8NE35 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.35■□□□□ 0.53
CPEB3Q8NE35 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CPEB3Q8NE35 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPEB3Q8NE35 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.35■□□□□ 0.53
CPEB3Q8NE35 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.35■□□□□ 0.53
CPEB3Q8NE35 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CPEB3Q8NE35 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPEB3Q8NE35 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.35■□□□□ 0.53
CPEB3Q8NE35 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.35■□□□□ 0.53
CPEB3Q8NE35 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.35■□□□□ 0.53
CPEB3Q8NE35 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPEB3Q8NE35 AC104187.1-201ENST00000607510 612 ntBASIC18.35■□□□□ 0.53
CPEB3Q8NE35 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPEB3Q8NE35 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.35■□□□□ 0.53
CPEB3Q8NE35 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.35■□□□□ 0.53
CPEB3Q8NE35 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPEB3Q8NE35 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPEB3Q8NE35 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.34■□□□□ 0.53
CPEB3Q8NE35 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.34■□□□□ 0.53
CPEB3Q8NE35 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPEB3Q8NE35 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CPEB3Q8NE35 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.34■□□□□ 0.53
CPEB3Q8NE35 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPEB3Q8NE35 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.34■□□□□ 0.53
CPEB3Q8NE35 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.34■□□□□ 0.53
CPEB3Q8NE35 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.34■□□□□ 0.53
CPEB3Q8NE35 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.34■□□□□ 0.53
CPEB3Q8NE35 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms