Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC168Q8NDH2 AC133681.1-201ENST00000465482 601 ntBASIC17.75■□□□□ 0.43
CCDC168Q8NDH2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC168Q8NDH2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC168Q8NDH2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC168Q8NDH2 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC168Q8NDH2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC168Q8NDH2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC168Q8NDH2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC168Q8NDH2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC168Q8NDH2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC168Q8NDH2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC168Q8NDH2 AP003733.4-201ENST00000623785 1697 ntBASIC17.74■□□□□ 0.43
CCDC168Q8NDH2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC168Q8NDH2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC168Q8NDH2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC168Q8NDH2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCDC168Q8NDH2 AC239809.2-201ENST00000415381 517 ntBASIC17.74■□□□□ 0.43
CCDC168Q8NDH2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC168Q8NDH2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC168Q8NDH2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC168Q8NDH2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC168Q8NDH2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 AP006587.3-201ENST00000525742 1516 ntBASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 AL590326.2-201ENST00000625139 305 ntBASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC168Q8NDH2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC168Q8NDH2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC168Q8NDH2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC168Q8NDH2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC168Q8NDH2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC168Q8NDH2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC168Q8NDH2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC168Q8NDH2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC168Q8NDH2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC168Q8NDH2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC168Q8NDH2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC168Q8NDH2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC168Q8NDH2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC168Q8NDH2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC168Q8NDH2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC168Q8NDH2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.72■□□□□ 0.43
CCDC168Q8NDH2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC168Q8NDH2 AP003071.4-201ENST00000562276 1284 ntBASIC17.72■□□□□ 0.43
CCDC168Q8NDH2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC168Q8NDH2 OR7E47P-201ENST00000546390 1422 ntBASIC17.71■□□□□ 0.43
CCDC168Q8NDH2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC168Q8NDH2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC168Q8NDH2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC168Q8NDH2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC168Q8NDH2 PRKY-204ENST00000533551 1019 ntBASIC17.71■□□□□ 0.43
CCDC168Q8NDH2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC168Q8NDH2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC168Q8NDH2 AL034346.1-201ENST00000568244 1277 ntBASIC17.71■□□□□ 0.42
CCDC168Q8NDH2 AC092368.3-202ENST00000574180 1591 ntBASIC17.7■□□□□ 0.42
CCDC168Q8NDH2 ABCB10P4-201ENST00000566803 2184 ntBASIC17.7■□□□□ 0.42
CCDC168Q8NDH2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC168Q8NDH2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC168Q8NDH2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC168Q8NDH2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC168Q8NDH2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC168Q8NDH2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC168Q8NDH2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC168Q8NDH2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC168Q8NDH2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CCDC168Q8NDH2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC168Q8NDH2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC168Q8NDH2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC168Q8NDH2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC168Q8NDH2 AC243732.1-201ENST00000612648 864 ntBASIC17.7■□□□□ 0.42
CCDC168Q8NDH2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC168Q8NDH2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC168Q8NDH2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC168Q8NDH2 AC004812.2-201ENST00000611079 2094 ntBASIC17.69■□□□□ 0.42
CCDC168Q8NDH2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC168Q8NDH2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CCDC168Q8NDH2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC168Q8NDH2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC168Q8NDH2 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC168Q8NDH2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms