Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZNRF1Q8ND25 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZNRF1Q8ND25 AC004854.2-201ENST00000608450 1441 ntBASIC17.58■□□□□ 0.41
ZNRF1Q8ND25 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNRF1Q8ND25 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
ZNRF1Q8ND25 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNRF1Q8ND25 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNRF1Q8ND25 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.58■□□□□ 0.4
ZNRF1Q8ND25 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.58■□□□□ 0.4
ZNRF1Q8ND25 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.58■□□□□ 0.4
ZNRF1Q8ND25 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNRF1Q8ND25 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.58■□□□□ 0.4
ZNRF1Q8ND25 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.58■□□□□ 0.4
ZNRF1Q8ND25 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.58■□□□□ 0.4
ZNRF1Q8ND25 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.58■□□□□ 0.4
ZNRF1Q8ND25 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNRF1Q8ND25 AC104187.1-201ENST00000607510 612 ntBASIC17.58■□□□□ 0.4
ZNRF1Q8ND25 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
ZNRF1Q8ND25 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ZNRF1Q8ND25 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNRF1Q8ND25 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNRF1Q8ND25 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
ZNRF1Q8ND25 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNRF1Q8ND25 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNRF1Q8ND25 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNRF1Q8ND25 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNRF1Q8ND25 AP004607.4-201ENST00000530158 1459 ntBASIC17.57■□□□□ 0.4
ZNRF1Q8ND25 AL137060.1-201ENST00000618151 2648 ntBASIC17.57■□□□□ 0.4
ZNRF1Q8ND25 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNRF1Q8ND25 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
ZNRF1Q8ND25 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNRF1Q8ND25 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.57■□□□□ 0.4
ZNRF1Q8ND25 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNRF1Q8ND25 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ZNRF1Q8ND25 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNRF1Q8ND25 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNRF1Q8ND25 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ZNRF1Q8ND25 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNRF1Q8ND25 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNRF1Q8ND25 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNRF1Q8ND25 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNRF1Q8ND25 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNRF1Q8ND25 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ZNRF1Q8ND25 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ZNRF1Q8ND25 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ZNRF1Q8ND25 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNRF1Q8ND25 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNRF1Q8ND25 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNRF1Q8ND25 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNRF1Q8ND25 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNRF1Q8ND25 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNRF1Q8ND25 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.56■□□□□ 0.4
ZNRF1Q8ND25 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNRF1Q8ND25 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNRF1Q8ND25 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNRF1Q8ND25 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNRF1Q8ND25 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.56■□□□□ 0.4
ZNRF1Q8ND25 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNRF1Q8ND25 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.56■□□□□ 0.4
ZNRF1Q8ND25 NTF6G-201ENST00000591094 616 ntBASIC17.56■□□□□ 0.4
ZNRF1Q8ND25 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNRF1Q8ND25 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNRF1Q8ND25 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.56■□□□□ 0.4
ZNRF1Q8ND25 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNRF1Q8ND25 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNRF1Q8ND25 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.55■□□□□ 0.4
ZNRF1Q8ND25 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ZNRF1Q8ND25 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF1Q8ND25 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF1Q8ND25 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF1Q8ND25 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNRF1Q8ND25 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNRF1Q8ND25 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.55■□□□□ 0.4
ZNRF1Q8ND25 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.55■□□□□ 0.4
ZNRF1Q8ND25 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.55■□□□□ 0.4
ZNRF1Q8ND25 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF1Q8ND25 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF1Q8ND25 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNRF1Q8ND25 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
ZNRF1Q8ND25 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.55■□□□□ 0.4
ZNRF1Q8ND25 AF106564.1-201ENST00000607058 2553 ntBASIC17.55■□□□□ 0.4
ZNRF1Q8ND25 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ZNRF1Q8ND25 AL024507.2-201ENST00000606070 2574 ntBASIC17.54■□□□□ 0.4
ZNRF1Q8ND25 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF1Q8ND25 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
ZNRF1Q8ND25 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNRF1Q8ND25 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF1Q8ND25 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF1Q8ND25 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF1Q8ND25 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNRF1Q8ND25 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF1Q8ND25 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNRF1Q8ND25 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF1Q8ND25 AC138907.5-202ENST00000569484 235 ntBASIC17.54■□□□□ 0.4
ZNRF1Q8ND25 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF1Q8ND25 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNRF1Q8ND25 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNRF1Q8ND25 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF1Q8ND25 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNRF1Q8ND25 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms