Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF39Q8N4T4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF39Q8N4T4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ARHGEF39Q8N4T4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ARHGEF39Q8N4T4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF39Q8N4T4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ARHGEF39Q8N4T4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF39Q8N4T4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
ARHGEF39Q8N4T4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.92■□□□□ 0.78
ARHGEF39Q8N4T4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ARHGEF39Q8N4T4 AC090192.1-201ENST00000517740 490 ntBASIC19.92■□□□□ 0.78
ARHGEF39Q8N4T4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.92■□□□□ 0.78
ARHGEF39Q8N4T4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ARHGEF39Q8N4T4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ARHGEF39Q8N4T4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ARHGEF39Q8N4T4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ARHGEF39Q8N4T4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ARHGEF39Q8N4T4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ARHGEF39Q8N4T4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ARHGEF39Q8N4T4 AC244015.2-201ENST00000616358 1861 ntBASIC19.92■□□□□ 0.78
ARHGEF39Q8N4T4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.92■□□□□ 0.78
ARHGEF39Q8N4T4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.92■□□□□ 0.78
ARHGEF39Q8N4T4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ARHGEF39Q8N4T4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ARHGEF39Q8N4T4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
ARHGEF39Q8N4T4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ARHGEF39Q8N4T4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.91■□□□□ 0.78
ARHGEF39Q8N4T4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ARHGEF39Q8N4T4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.91■□□□□ 0.78
ARHGEF39Q8N4T4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.91■□□□□ 0.78
ARHGEF39Q8N4T4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.91■□□□□ 0.78
ARHGEF39Q8N4T4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
ARHGEF39Q8N4T4 AC079834.2-201ENST00000609776 1949 ntBASIC19.91■□□□□ 0.78
ARHGEF39Q8N4T4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.91■□□□□ 0.78
ARHGEF39Q8N4T4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ARHGEF39Q8N4T4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
ARHGEF39Q8N4T4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ARHGEF39Q8N4T4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ARHGEF39Q8N4T4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ARHGEF39Q8N4T4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF39Q8N4T4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF39Q8N4T4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.9■□□□□ 0.78
ARHGEF39Q8N4T4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF39Q8N4T4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.9■□□□□ 0.78
ARHGEF39Q8N4T4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF39Q8N4T4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF39Q8N4T4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.9■□□□□ 0.78
ARHGEF39Q8N4T4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF39Q8N4T4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
ARHGEF39Q8N4T4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF39Q8N4T4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.9■□□□□ 0.78
ARHGEF39Q8N4T4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF39Q8N4T4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF39Q8N4T4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
ARHGEF39Q8N4T4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ARHGEF39Q8N4T4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ARHGEF39Q8N4T4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ARHGEF39Q8N4T4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ARHGEF39Q8N4T4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.89■□□□□ 0.77
ARHGEF39Q8N4T4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ARHGEF39Q8N4T4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ARHGEF39Q8N4T4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.89■□□□□ 0.77
ARHGEF39Q8N4T4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ARHGEF39Q8N4T4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.89■□□□□ 0.77
ARHGEF39Q8N4T4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.89■□□□□ 0.77
ARHGEF39Q8N4T4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.89■□□□□ 0.77
ARHGEF39Q8N4T4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ARHGEF39Q8N4T4 RBM17P2-201ENST00000616397 1405 ntBASIC19.89■□□□□ 0.77
ARHGEF39Q8N4T4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.89■□□□□ 0.77
ARHGEF39Q8N4T4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ARHGEF39Q8N4T4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ARHGEF39Q8N4T4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 FBXW4P1-201ENST00000426721 2239 ntBASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 TERF1P5-201ENST00000477545 1207 ntBASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 AC243732.1-201ENST00000612648 864 ntBASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 AC120498.10-201ENST00000621827 505 ntBASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARHGEF39Q8N4T4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ARHGEF39Q8N4T4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms