Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.03■□□□□ 0.8
COL27A1Q8IZC6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL27A1Q8IZC6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
COL27A1Q8IZC6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.03■□□□□ 0.8
COL27A1Q8IZC6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
COL27A1Q8IZC6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL27A1Q8IZC6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.03■□□□□ 0.8
COL27A1Q8IZC6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.03■□□□□ 0.8
COL27A1Q8IZC6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.03■□□□□ 0.8
COL27A1Q8IZC6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.03■□□□□ 0.8
COL27A1Q8IZC6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.03■□□□□ 0.8
COL27A1Q8IZC6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.03■□□□□ 0.8
COL27A1Q8IZC6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.03■□□□□ 0.8
COL27A1Q8IZC6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.03■□□□□ 0.8
COL27A1Q8IZC6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL27A1Q8IZC6 C11orf96-202ENST00000528572 1834 ntBASIC20.02■□□□□ 0.8
COL27A1Q8IZC6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL27A1Q8IZC6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
COL27A1Q8IZC6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL27A1Q8IZC6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL27A1Q8IZC6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.02■□□□□ 0.8
COL27A1Q8IZC6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.02■□□□□ 0.8
COL27A1Q8IZC6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL27A1Q8IZC6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL27A1Q8IZC6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL27A1Q8IZC6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
COL27A1Q8IZC6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 PNMA6B-201ENST00000538162 1200 ntBASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL27A1Q8IZC6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL27A1Q8IZC6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COL27A1Q8IZC6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20■□□□□ 0.79
COL27A1Q8IZC6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
COL27A1Q8IZC6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
COL27A1Q8IZC6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 AC100791.3-201ENST00000617619 330 ntBASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 AC233263.1-201ENST00000578059 224 ntBASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL27A1Q8IZC6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COL27A1Q8IZC6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.98■□□□□ 0.79
COL27A1Q8IZC6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COL27A1Q8IZC6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.98■□□□□ 0.79
COL27A1Q8IZC6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL27A1Q8IZC6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL27A1Q8IZC6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL27A1Q8IZC6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL27A1Q8IZC6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
COL27A1Q8IZC6 AC069544.1-201ENST00000609399 999 ntBASIC19.98■□□□□ 0.79
COL27A1Q8IZC6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.98■□□□□ 0.79
COL27A1Q8IZC6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL27A1Q8IZC6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL27A1Q8IZC6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL27A1Q8IZC6 AC127496.7-201ENST00000625110 1798 ntBASIC19.97■□□□□ 0.79
COL27A1Q8IZC6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL27A1Q8IZC6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.97■□□□□ 0.79
COL27A1Q8IZC6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL27A1Q8IZC6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL27A1Q8IZC6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms