Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TRIM42Q8IWZ5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TRIM42Q8IWZ5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM42Q8IWZ5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM42Q8IWZ5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM42Q8IWZ5 AC006128.1-201ENST00000624704 1661 ntBASIC20.9■□□□□ 0.94
TRIM42Q8IWZ5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM42Q8IWZ5 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM42Q8IWZ5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM42Q8IWZ5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM42Q8IWZ5 AC010141.3-201ENST00000456659 717 ntBASIC20.9■□□□□ 0.94
TRIM42Q8IWZ5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
TRIM42Q8IWZ5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM42Q8IWZ5 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM42Q8IWZ5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM42Q8IWZ5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM42Q8IWZ5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM42Q8IWZ5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM42Q8IWZ5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TRIM42Q8IWZ5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM42Q8IWZ5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM42Q8IWZ5 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM42Q8IWZ5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM42Q8IWZ5 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM42Q8IWZ5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM42Q8IWZ5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM42Q8IWZ5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM42Q8IWZ5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM42Q8IWZ5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.89■□□□□ 0.93
TRIM42Q8IWZ5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM42Q8IWZ5 pRNA.6-201ENST00000610482 90 ntBASIC20.89■□□□□ 0.93
TRIM42Q8IWZ5 pRNA.5-201ENST00000612139 90 ntBASIC20.89■□□□□ 0.93
TRIM42Q8IWZ5 pRNA.11-201ENST00000618423 90 ntBASIC20.89■□□□□ 0.93
TRIM42Q8IWZ5 pRNA.13-201ENST00000619112 90 ntBASIC20.89■□□□□ 0.93
TRIM42Q8IWZ5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM42Q8IWZ5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TRIM42Q8IWZ5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM42Q8IWZ5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
TRIM42Q8IWZ5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM42Q8IWZ5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM42Q8IWZ5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM42Q8IWZ5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM42Q8IWZ5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM42Q8IWZ5 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 AP005212.1-201ENST00000581547 1997 ntBASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
TRIM42Q8IWZ5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM42Q8IWZ5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM42Q8IWZ5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM42Q8IWZ5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.87■□□□□ 0.93
TRIM42Q8IWZ5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM42Q8IWZ5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.87■□□□□ 0.93
TRIM42Q8IWZ5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM42Q8IWZ5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
TRIM42Q8IWZ5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM42Q8IWZ5 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM42Q8IWZ5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM42Q8IWZ5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.87■□□□□ 0.93
TRIM42Q8IWZ5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.87■□□□□ 0.93
TRIM42Q8IWZ5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.87■□□□□ 0.93
TRIM42Q8IWZ5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM42Q8IWZ5 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM42Q8IWZ5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM42Q8IWZ5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM42Q8IWZ5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.87■□□□□ 0.93
TRIM42Q8IWZ5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM42Q8IWZ5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM42Q8IWZ5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TRIM42Q8IWZ5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM42Q8IWZ5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM42Q8IWZ5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM42Q8IWZ5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM42Q8IWZ5 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM42Q8IWZ5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM42Q8IWZ5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM42Q8IWZ5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TRIM42Q8IWZ5 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM42Q8IWZ5 AC003102.1-202ENST00000563394 1796 ntBASIC20.86■□□□□ 0.93
TRIM42Q8IWZ5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.86■□□□□ 0.93
TRIM42Q8IWZ5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM42Q8IWZ5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms