Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD2Q8IV50 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD2Q8IV50 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
LYSMD2Q8IV50 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD2Q8IV50 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD2Q8IV50 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.46■□□□□ 0.55
LYSMD2Q8IV50 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.46■□□□□ 0.55
LYSMD2Q8IV50 MIR4281-201ENST00000580852 62 ntBASIC18.46■□□□□ 0.55
LYSMD2Q8IV50 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD2Q8IV50 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LYSMD2Q8IV50 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD2Q8IV50 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD2Q8IV50 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.46■□□□□ 0.55
LYSMD2Q8IV50 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD2Q8IV50 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.46■□□□□ 0.55
LYSMD2Q8IV50 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYSMD2Q8IV50 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LYSMD2Q8IV50 LINC01529-204ENST00000636474 1715 ntBASIC18.46■□□□□ 0.55
LYSMD2Q8IV50 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LYSMD2Q8IV50 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.45■□□□□ 0.54
LYSMD2Q8IV50 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD2Q8IV50 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD2Q8IV50 AC027702.1-201ENST00000563810 1770 ntBASIC18.45■□□□□ 0.54
LYSMD2Q8IV50 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LYSMD2Q8IV50 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LYSMD2Q8IV50 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD2Q8IV50 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD2Q8IV50 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
LYSMD2Q8IV50 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LYSMD2Q8IV50 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.45■□□□□ 0.54
LYSMD2Q8IV50 KRT18P24-201ENST00000344739 1156 ntBASIC18.45■□□□□ 0.54
LYSMD2Q8IV50 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.45■□□□□ 0.54
LYSMD2Q8IV50 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD2Q8IV50 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD2Q8IV50 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LYSMD2Q8IV50 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LYSMD2Q8IV50 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LYSMD2Q8IV50 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.43■□□□□ 0.54
LYSMD2Q8IV50 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD2Q8IV50 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD2Q8IV50 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.43■□□□□ 0.54
LYSMD2Q8IV50 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
LYSMD2Q8IV50 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD2Q8IV50 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD2Q8IV50 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD2Q8IV50 KRT18P60-201ENST00000312876 1297 ntBASIC18.43■□□□□ 0.54
LYSMD2Q8IV50 THA1P-201ENST00000590384 1145 ntBASIC18.43■□□□□ 0.54
LYSMD2Q8IV50 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD2Q8IV50 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD2Q8IV50 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD2Q8IV50 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD2Q8IV50 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD2Q8IV50 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LYSMD2Q8IV50 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms