Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.63■■□□□ 1.05
CCDC25Q86WR0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CCDC25Q86WR0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CCDC25Q86WR0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC25Q86WR0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC25Q86WR0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC25Q86WR0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC25Q86WR0 AL034346.1-201ENST00000568244 1277 ntBASIC21.63■■□□□ 1.05
CCDC25Q86WR0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC25Q86WR0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC25Q86WR0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC25Q86WR0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CCDC25Q86WR0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC25Q86WR0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC25Q86WR0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC25Q86WR0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CCDC25Q86WR0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC25Q86WR0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC25Q86WR0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC25Q86WR0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC25Q86WR0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC25Q86WR0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC25Q86WR0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC25Q86WR0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC25Q86WR0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CCDC25Q86WR0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC25Q86WR0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC25Q86WR0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC25Q86WR0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC25Q86WR0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CCDC25Q86WR0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC25Q86WR0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC25Q86WR0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC25Q86WR0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC25Q86WR0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC25Q86WR0 AL356740.2-201ENST00000601559 647 ntBASIC21.61■■□□□ 1.05
CCDC25Q86WR0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC25Q86WR0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CCDC25Q86WR0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CCDC25Q86WR0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC25Q86WR0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC25Q86WR0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC25Q86WR0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC25Q86WR0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC25Q86WR0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC25Q86WR0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC25Q86WR0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.6■■□□□ 1.05
CCDC25Q86WR0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CCDC25Q86WR0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC25Q86WR0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC25Q86WR0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC25Q86WR0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC25Q86WR0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.6■■□□□ 1.05
CCDC25Q86WR0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CCDC25Q86WR0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC25Q86WR0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CCDC25Q86WR0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC25Q86WR0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC25Q86WR0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC25Q86WR0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CCDC25Q86WR0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC25Q86WR0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC25Q86WR0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC25Q86WR0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC25Q86WR0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC25Q86WR0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC25Q86WR0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CCDC25Q86WR0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC25Q86WR0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC25Q86WR0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC25Q86WR0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
CCDC25Q86WR0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CCDC25Q86WR0 PCDHAC2-203ENST00000615316 3011 ntBASIC21.58■■□□□ 1.05
CCDC25Q86WR0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CCDC25Q86WR0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC25Q86WR0 SRD5A1P1-201ENST00000442297 786 ntBASIC21.58■■□□□ 1.05
CCDC25Q86WR0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.58■■□□□ 1.05
CCDC25Q86WR0 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.58■■□□□ 1.05
CCDC25Q86WR0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC25Q86WR0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC25Q86WR0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC25Q86WR0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CCDC25Q86WR0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC25Q86WR0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC25Q86WR0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC25Q86WR0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
CCDC25Q86WR0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.58■■□□□ 1.04
CCDC25Q86WR0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.58■■□□□ 1.04
CCDC25Q86WR0 AL391422.3-201ENST00000603791 2761 ntBASIC21.58■■□□□ 1.04
CCDC25Q86WR0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CCDC25Q86WR0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
CCDC25Q86WR0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC25Q86WR0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC25Q86WR0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC25Q86WR0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC25Q86WR0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC25Q86WR0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CCDC25Q86WR0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC25Q86WR0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC25Q86WR0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms