Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.14■□□□□ 0.98
LYSMD3Q7Z3D4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LYSMD3Q7Z3D4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LYSMD3Q7Z3D4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
LYSMD3Q7Z3D4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LYSMD3Q7Z3D4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.14■□□□□ 0.97
LYSMD3Q7Z3D4 AC138907.5-202ENST00000569484 235 ntBASIC21.14■□□□□ 0.97
LYSMD3Q7Z3D4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
LYSMD3Q7Z3D4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LYSMD3Q7Z3D4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LYSMD3Q7Z3D4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LYSMD3Q7Z3D4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LYSMD3Q7Z3D4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
LYSMD3Q7Z3D4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LYSMD3Q7Z3D4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LYSMD3Q7Z3D4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
LYSMD3Q7Z3D4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LYSMD3Q7Z3D4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD3Q7Z3D4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD3Q7Z3D4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD3Q7Z3D4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
LYSMD3Q7Z3D4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.13■□□□□ 0.97
LYSMD3Q7Z3D4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.13■□□□□ 0.97
LYSMD3Q7Z3D4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.13■□□□□ 0.97
LYSMD3Q7Z3D4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
LYSMD3Q7Z3D4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.13■□□□□ 0.97
LYSMD3Q7Z3D4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD3Q7Z3D4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.12■□□□□ 0.97
LYSMD3Q7Z3D4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.12■□□□□ 0.97
LYSMD3Q7Z3D4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LYSMD3Q7Z3D4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LYSMD3Q7Z3D4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
LYSMD3Q7Z3D4 KRT19P1-201ENST00000405746 1186 ntBASIC21.12■□□□□ 0.97
LYSMD3Q7Z3D4 AC010141.2-201ENST00000452426 721 ntBASIC21.12■□□□□ 0.97
LYSMD3Q7Z3D4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
LYSMD3Q7Z3D4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.12■□□□□ 0.97
LYSMD3Q7Z3D4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.12■□□□□ 0.97
LYSMD3Q7Z3D4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.12■□□□□ 0.97
LYSMD3Q7Z3D4 AP001160.3-201ENST00000601484 763 ntBASIC21.12■□□□□ 0.97
LYSMD3Q7Z3D4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LYSMD3Q7Z3D4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LYSMD3Q7Z3D4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LYSMD3Q7Z3D4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LYSMD3Q7Z3D4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LYSMD3Q7Z3D4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LYSMD3Q7Z3D4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.11■□□□□ 0.97
LYSMD3Q7Z3D4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LYSMD3Q7Z3D4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
LYSMD3Q7Z3D4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LYSMD3Q7Z3D4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LYSMD3Q7Z3D4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.11■□□□□ 0.97
LYSMD3Q7Z3D4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.11■□□□□ 0.97
LYSMD3Q7Z3D4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.11■□□□□ 0.97
LYSMD3Q7Z3D4 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.11■□□□□ 0.97
LYSMD3Q7Z3D4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.11■□□□□ 0.97
LYSMD3Q7Z3D4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LYSMD3Q7Z3D4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LYSMD3Q7Z3D4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LYSMD3Q7Z3D4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
LYSMD3Q7Z3D4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LYSMD3Q7Z3D4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LYSMD3Q7Z3D4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
LYSMD3Q7Z3D4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.1■□□□□ 0.97
LYSMD3Q7Z3D4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.1■□□□□ 0.97
LYSMD3Q7Z3D4 Z98882.1-201ENST00000622160 2253 ntBASIC21.1■□□□□ 0.97
LYSMD3Q7Z3D4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
LYSMD3Q7Z3D4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LYSMD3Q7Z3D4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
LYSMD3Q7Z3D4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
LYSMD3Q7Z3D4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LYSMD3Q7Z3D4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LYSMD3Q7Z3D4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.1■□□□□ 0.97
LYSMD3Q7Z3D4 AC022517.1-201ENST00000592429 346 ntBASIC21.1■□□□□ 0.97
LYSMD3Q7Z3D4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
LYSMD3Q7Z3D4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
LYSMD3Q7Z3D4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.1■□□□□ 0.97
LYSMD3Q7Z3D4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.1■□□□□ 0.97
LYSMD3Q7Z3D4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LYSMD3Q7Z3D4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD3Q7Z3D4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD3Q7Z3D4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.09■□□□□ 0.97
LYSMD3Q7Z3D4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD3Q7Z3D4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD3Q7Z3D4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD3Q7Z3D4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD3Q7Z3D4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
LYSMD3Q7Z3D4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
LYSMD3Q7Z3D4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD3Q7Z3D4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD3Q7Z3D4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.09■□□□□ 0.97
LYSMD3Q7Z3D4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD3Q7Z3D4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.09■□□□□ 0.97
LYSMD3Q7Z3D4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.09■□□□□ 0.97
LYSMD3Q7Z3D4 AC061975.6-201ENST00000579045 1553 ntBASIC21.09■□□□□ 0.97
LYSMD3Q7Z3D4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LYSMD3Q7Z3D4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LYSMD3Q7Z3D4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
LYSMD3Q7Z3D4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LYSMD3Q7Z3D4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LYSMD3Q7Z3D4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms