Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCXQ7RTU7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCXQ7RTU7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC13.81□□□□□ -0.2
SCXQ7RTU7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCXQ7RTU7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCXQ7RTU7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC13.8□□□□□ -0.2
SCXQ7RTU7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCXQ7RTU7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCXQ7RTU7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC13.8□□□□□ -0.2
SCXQ7RTU7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC13.8□□□□□ -0.2
SCXQ7RTU7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCXQ7RTU7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCXQ7RTU7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC13.8□□□□□ -0.2
SCXQ7RTU7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SCXQ7RTU7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCXQ7RTU7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCXQ7RTU7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCXQ7RTU7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCXQ7RTU7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCXQ7RTU7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC13.8□□□□□ -0.2
SCXQ7RTU7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC13.8□□□□□ -0.2
SCXQ7RTU7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC13.8□□□□□ -0.2
SCXQ7RTU7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC13.8□□□□□ -0.2
SCXQ7RTU7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCXQ7RTU7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC13.8□□□□□ -0.2
SCXQ7RTU7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SCXQ7RTU7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SCXQ7RTU7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCXQ7RTU7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCXQ7RTU7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SCXQ7RTU7 AC004854.2-201ENST00000608450 1441 ntBASIC13.8□□□□□ -0.2
SCXQ7RTU7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCXQ7RTU7 OXCT2P1-201ENST00000447263 1535 ntBASIC13.8□□□□□ -0.2
SCXQ7RTU7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCXQ7RTU7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCXQ7RTU7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCXQ7RTU7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCXQ7RTU7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SCXQ7RTU7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCXQ7RTU7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SCXQ7RTU7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCXQ7RTU7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.79□□□□□ -0.2
SCXQ7RTU7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCXQ7RTU7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SCXQ7RTU7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SCXQ7RTU7 DBI-210ENST00000542275 757 ntTSL 5 BASIC13.79□□□□□ -0.2
SCXQ7RTU7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC13.79□□□□□ -0.2
SCXQ7RTU7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC13.79□□□□□ -0.2
SCXQ7RTU7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCXQ7RTU7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SCXQ7RTU7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCXQ7RTU7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC13.79□□□□□ -0.2
SCXQ7RTU7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCXQ7RTU7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC13.79□□□□□ -0.2
SCXQ7RTU7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCXQ7RTU7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC13.79□□□□□ -0.2
SCXQ7RTU7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCXQ7RTU7 DUSP8P3-201ENST00000399571 1760 ntBASIC13.78□□□□□ -0.2
SCXQ7RTU7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCXQ7RTU7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCXQ7RTU7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCXQ7RTU7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCXQ7RTU7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
SCXQ7RTU7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCXQ7RTU7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCXQ7RTU7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13.78□□□□□ -0.2
SCXQ7RTU7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
SCXQ7RTU7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC13.78□□□□□ -0.2
SCXQ7RTU7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCXQ7RTU7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.78□□□□□ -0.2
SCXQ7RTU7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SCXQ7RTU7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
SCXQ7RTU7 AP004607.4-201ENST00000530158 1459 ntBASIC13.78□□□□□ -0.2
SCXQ7RTU7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCXQ7RTU7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC13.78□□□□□ -0.2
SCXQ7RTU7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
SCXQ7RTU7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SCXQ7RTU7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCXQ7RTU7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC13.78□□□□□ -0.2
SCXQ7RTU7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC13.78□□□□□ -0.2
SCXQ7RTU7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SCXQ7RTU7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCXQ7RTU7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
SCXQ7RTU7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
SCXQ7RTU7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCXQ7RTU7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCXQ7RTU7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCXQ7RTU7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCXQ7RTU7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC13.77□□□□□ -0.21
SCXQ7RTU7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC13.77□□□□□ -0.21
SCXQ7RTU7 ECEL1P1-201ENST00000373592 1742 ntBASIC13.77□□□□□ -0.21
SCXQ7RTU7 ID1-201ENST00000376105 1233 ntBASIC13.77□□□□□ -0.21
SCXQ7RTU7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SCXQ7RTU7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
SCXQ7RTU7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SCXQ7RTU7 AC006015.1-201ENST00000429970 570 ntBASIC13.77□□□□□ -0.21
SCXQ7RTU7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SCXQ7RTU7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SCXQ7RTU7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCXQ7RTU7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms