Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP1BQ7LBR1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP1BQ7LBR1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP1BQ7LBR1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CHMP1BQ7LBR1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP1BQ7LBR1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
CHMP1BQ7LBR1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP1BQ7LBR1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.27■□□□□ 0.68
CHMP1BQ7LBR1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.27■□□□□ 0.68
CHMP1BQ7LBR1 ECEL1P1-201ENST00000373592 1742 ntBASIC19.27■□□□□ 0.68
CHMP1BQ7LBR1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP1BQ7LBR1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHMP1BQ7LBR1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHMP1BQ7LBR1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHMP1BQ7LBR1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHMP1BQ7LBR1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 AL137784.2-201ENST00000607332 1000 ntBASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.26■□□□□ 0.67
CHMP1BQ7LBR1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.25■□□□□ 0.67
CHMP1BQ7LBR1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP1BQ7LBR1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CHMP1BQ7LBR1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP1BQ7LBR1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP1BQ7LBR1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHMP1BQ7LBR1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP1BQ7LBR1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP1BQ7LBR1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP1BQ7LBR1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP1BQ7LBR1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP1BQ7LBR1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.25■□□□□ 0.67
CHMP1BQ7LBR1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.25■□□□□ 0.67
CHMP1BQ7LBR1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.25■□□□□ 0.67
CHMP1BQ7LBR1 AC022517.1-201ENST00000592429 346 ntBASIC19.25■□□□□ 0.67
CHMP1BQ7LBR1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP1BQ7LBR1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP1BQ7LBR1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHMP1BQ7LBR1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP1BQ7LBR1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP1BQ7LBR1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP1BQ7LBR1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP1BQ7LBR1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CHMP1BQ7LBR1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.24■□□□□ 0.67
CHMP1BQ7LBR1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP1BQ7LBR1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.24■□□□□ 0.67
CHMP1BQ7LBR1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CHMP1BQ7LBR1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CHMP1BQ7LBR1 KRT19P1-201ENST00000405746 1186 ntBASIC19.24■□□□□ 0.67
CHMP1BQ7LBR1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.24■□□□□ 0.67
CHMP1BQ7LBR1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.24■□□□□ 0.67
CHMP1BQ7LBR1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.24■□□□□ 0.67
CHMP1BQ7LBR1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.24■□□□□ 0.67
CHMP1BQ7LBR1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.24■□□□□ 0.67
CHMP1BQ7LBR1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP1BQ7LBR1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP1BQ7LBR1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP1BQ7LBR1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CHMP1BQ7LBR1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CHMP1BQ7LBR1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP1BQ7LBR1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP1BQ7LBR1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.24■□□□□ 0.67
CHMP1BQ7LBR1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
CHMP1BQ7LBR1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP1BQ7LBR1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CHMP1BQ7LBR1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP1BQ7LBR1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.23■□□□□ 0.67
CHMP1BQ7LBR1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CHMP1BQ7LBR1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP1BQ7LBR1 AC016769.1-201ENST00000409132 1010 ntBASIC19.23■□□□□ 0.67
CHMP1BQ7LBR1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.23■□□□□ 0.67
CHMP1BQ7LBR1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.23■□□□□ 0.67
CHMP1BQ7LBR1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CHMP1BQ7LBR1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.23■□□□□ 0.67
CHMP1BQ7LBR1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
CHMP1BQ7LBR1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP1BQ7LBR1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP1BQ7LBR1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.23■□□□□ 0.67
CHMP1BQ7LBR1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.23■□□□□ 0.67
CHMP1BQ7LBR1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP1BQ7LBR1 AC139530.1-201ENST00000575312 1977 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms