Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CNKSR3Q6P9H4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CNKSR3Q6P9H4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.82■■□□□ 1.24
CNKSR3Q6P9H4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
CNKSR3Q6P9H4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
CNKSR3Q6P9H4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CNKSR3Q6P9H4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CNKSR3Q6P9H4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
CNKSR3Q6P9H4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.82■■□□□ 1.24
CNKSR3Q6P9H4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CNKSR3Q6P9H4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 AC003102.1-202ENST00000563394 1796 ntBASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 AC245052.3-201ENST00000450182 901 ntBASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.81■■□□□ 1.24
CNKSR3Q6P9H4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CNKSR3Q6P9H4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.8■■□□□ 1.24
CNKSR3Q6P9H4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CNKSR3Q6P9H4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CNKSR3Q6P9H4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.8■■□□□ 1.24
CNKSR3Q6P9H4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
CNKSR3Q6P9H4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.8■■□□□ 1.24
CNKSR3Q6P9H4 AL589743.5-201ENST00000616611 1050 ntBASIC22.8■■□□□ 1.24
CNKSR3Q6P9H4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CNKSR3Q6P9H4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
CNKSR3Q6P9H4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CNKSR3Q6P9H4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.79■■□□□ 1.24
CNKSR3Q6P9H4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.79■■□□□ 1.24
CNKSR3Q6P9H4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.79■■□□□ 1.24
CNKSR3Q6P9H4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CNKSR3Q6P9H4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CNKSR3Q6P9H4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CNKSR3Q6P9H4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.79■■□□□ 1.24
CNKSR3Q6P9H4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.79■■□□□ 1.24
CNKSR3Q6P9H4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.79■■□□□ 1.24
CNKSR3Q6P9H4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.79■■□□□ 1.24
CNKSR3Q6P9H4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.79■■□□□ 1.24
CNKSR3Q6P9H4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
CNKSR3Q6P9H4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CNKSR3Q6P9H4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CNKSR3Q6P9H4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CNKSR3Q6P9H4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.78■■□□□ 1.24
CNKSR3Q6P9H4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CNKSR3Q6P9H4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
CNKSR3Q6P9H4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
CNKSR3Q6P9H4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.78■■□□□ 1.24
CNKSR3Q6P9H4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.78■■□□□ 1.24
CNKSR3Q6P9H4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CNKSR3Q6P9H4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CNKSR3Q6P9H4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CNKSR3Q6P9H4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CNKSR3Q6P9H4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.78■■□□□ 1.24
CNKSR3Q6P9H4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
CNKSR3Q6P9H4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CNKSR3Q6P9H4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
CNKSR3Q6P9H4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
CNKSR3Q6P9H4 MIR718-201ENST00000390190 70 ntBASIC22.77■■□□□ 1.24
CNKSR3Q6P9H4 MCRIP2P1-201ENST00000394346 511 ntBASIC22.77■■□□□ 1.24
CNKSR3Q6P9H4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CNKSR3Q6P9H4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.77■■□□□ 1.24
CNKSR3Q6P9H4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CNKSR3Q6P9H4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CNKSR3Q6P9H4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
CNKSR3Q6P9H4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.77■■□□□ 1.24
CNKSR3Q6P9H4 FAM197Y4-202ENST00000622692 608 ntBASIC22.77■■□□□ 1.24
CNKSR3Q6P9H4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.77■■□□□ 1.24
CNKSR3Q6P9H4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
CNKSR3Q6P9H4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
CNKSR3Q6P9H4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.77■■□□□ 1.24
CNKSR3Q6P9H4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CNKSR3Q6P9H4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CNKSR3Q6P9H4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CNKSR3Q6P9H4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
CNKSR3Q6P9H4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
CNKSR3Q6P9H4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.76■■□□□ 1.23
CNKSR3Q6P9H4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CNKSR3Q6P9H4 PNMA6B-201ENST00000538162 1200 ntBASIC22.76■■□□□ 1.23
CNKSR3Q6P9H4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.76■■□□□ 1.23
CNKSR3Q6P9H4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.76■■□□□ 1.23
CNKSR3Q6P9H4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.76■■□□□ 1.23
CNKSR3Q6P9H4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CNKSR3Q6P9H4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CNKSR3Q6P9H4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms