Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.11■□□□□ 0.65
TMEM53Q6P2H8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.11■□□□□ 0.65
TMEM53Q6P2H8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
TMEM53Q6P2H8 AC133561.4-201ENST00000566112 224 ntBASIC19.11■□□□□ 0.65
TMEM53Q6P2H8 AL031602.1-201ENST00000633169 911 ntBASIC19.11■□□□□ 0.65
TMEM53Q6P2H8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TMEM53Q6P2H8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
TMEM53Q6P2H8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TMEM53Q6P2H8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM53Q6P2H8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM53Q6P2H8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM53Q6P2H8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM53Q6P2H8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM53Q6P2H8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM53Q6P2H8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM53Q6P2H8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM53Q6P2H8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM53Q6P2H8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM53Q6P2H8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM53Q6P2H8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.1■□□□□ 0.65
TMEM53Q6P2H8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM53Q6P2H8 AC008764.7-201ENST00000593779 1081 ntBASIC19.1■□□□□ 0.65
TMEM53Q6P2H8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.1■□□□□ 0.65
TMEM53Q6P2H8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM53Q6P2H8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TMEM53Q6P2H8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM53Q6P2H8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TMEM53Q6P2H8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM53Q6P2H8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TMEM53Q6P2H8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM53Q6P2H8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.1■□□□□ 0.65
TMEM53Q6P2H8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.1■□□□□ 0.65
TMEM53Q6P2H8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM53Q6P2H8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 AP005435.1-201ENST00000529293 1178 ntBASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 AC027682.1-201ENST00000562846 899 ntBASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 AC126544.1-201ENST00000580842 1059 ntBASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TMEM53Q6P2H8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM53Q6P2H8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
TMEM53Q6P2H8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM53Q6P2H8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM53Q6P2H8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
TMEM53Q6P2H8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.08■□□□□ 0.64
TMEM53Q6P2H8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.08■□□□□ 0.64
TMEM53Q6P2H8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM53Q6P2H8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TMEM53Q6P2H8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.08■□□□□ 0.64
TMEM53Q6P2H8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM53Q6P2H8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM53Q6P2H8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.08■□□□□ 0.64
TMEM53Q6P2H8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM53Q6P2H8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM53Q6P2H8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM53Q6P2H8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM53Q6P2H8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TMEM53Q6P2H8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 C11orf96-202ENST00000528572 1834 ntBASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 AC010141.3-201ENST00000456659 717 ntBASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
TMEM53Q6P2H8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms