Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQA1Q5Y7H0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQA1Q5Y7H0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQA1Q5Y7H0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DQA1Q5Y7H0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQA1Q5Y7H0 AC008175.2-201ENST00000612840 297 ntBASIC19.6■□□□□ 0.73
HLA-DQA1Q5Y7H0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQA1Q5Y7H0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQA1Q5Y7H0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DQA1Q5Y7H0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQA1Q5Y7H0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQA1Q5Y7H0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HLA-DQA1Q5Y7H0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.6■□□□□ 0.73
HLA-DQA1Q5Y7H0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQA1Q5Y7H0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQA1Q5Y7H0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQA1Q5Y7H0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQA1Q5Y7H0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HLA-DQA1Q5Y7H0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQA1Q5Y7H0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQA1Q5Y7H0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-DQA1Q5Y7H0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQA1Q5Y7H0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HLA-DQA1Q5Y7H0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQA1Q5Y7H0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQA1Q5Y7H0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HLA-DQA1Q5Y7H0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQA1Q5Y7H0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-DQA1Q5Y7H0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQA1Q5Y7H0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQA1Q5Y7H0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HLA-DQA1Q5Y7H0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQA1Q5Y7H0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQA1Q5Y7H0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DQA1Q5Y7H0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DQA1Q5Y7H0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.58■□□□□ 0.73
HLA-DQA1Q5Y7H0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DQA1Q5Y7H0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.58■□□□□ 0.72
HLA-DQA1Q5Y7H0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
HLA-DQA1Q5Y7H0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.58■□□□□ 0.72
HLA-DQA1Q5Y7H0 AC138907.5-202ENST00000569484 235 ntBASIC19.58■□□□□ 0.72
HLA-DQA1Q5Y7H0 AC120498.10-201ENST00000621827 505 ntBASIC19.58■□□□□ 0.72
HLA-DQA1Q5Y7H0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DQA1Q5Y7H0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DQA1Q5Y7H0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.58■□□□□ 0.72
HLA-DQA1Q5Y7H0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DQA1Q5Y7H0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DQA1Q5Y7H0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQA1Q5Y7H0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQA1Q5Y7H0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQA1Q5Y7H0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-DQA1Q5Y7H0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQA1Q5Y7H0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-DQA1Q5Y7H0 AP001160.3-201ENST00000601484 763 ntBASIC19.57■□□□□ 0.72
HLA-DQA1Q5Y7H0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQA1Q5Y7H0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQA1Q5Y7H0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQA1Q5Y7H0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQA1Q5Y7H0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-DQA1Q5Y7H0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQA1Q5Y7H0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQA1Q5Y7H0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-DQA1Q5Y7H0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQA1Q5Y7H0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQA1Q5Y7H0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.56■□□□□ 0.72
HLA-DQA1Q5Y7H0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQA1Q5Y7H0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQA1Q5Y7H0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.56■□□□□ 0.72
HLA-DQA1Q5Y7H0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.56■□□□□ 0.72
HLA-DQA1Q5Y7H0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQA1Q5Y7H0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.56■□□□□ 0.72
HLA-DQA1Q5Y7H0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.56■□□□□ 0.72
HLA-DQA1Q5Y7H0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQA1Q5Y7H0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQA1Q5Y7H0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQA1Q5Y7H0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQA1Q5Y7H0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
HLA-DQA1Q5Y7H0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQA1Q5Y7H0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.55■□□□□ 0.72
HLA-DQA1Q5Y7H0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.55■□□□□ 0.72
HLA-DQA1Q5Y7H0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQA1Q5Y7H0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQA1Q5Y7H0 AC016769.1-201ENST00000409132 1010 ntBASIC19.55■□□□□ 0.72
HLA-DQA1Q5Y7H0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-DQA1Q5Y7H0 AC010141.2-201ENST00000452426 721 ntBASIC19.55■□□□□ 0.72
HLA-DQA1Q5Y7H0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-DQA1Q5Y7H0 AC137761.2-201ENST00000561729 223 ntBASIC19.55■□□□□ 0.72
HLA-DQA1Q5Y7H0 AC145350.3-201ENST00000569033 163 ntBASIC19.55■□□□□ 0.72
HLA-DQA1Q5Y7H0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-DQA1Q5Y7H0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.55■□□□□ 0.72
HLA-DQA1Q5Y7H0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
HLA-DQA1Q5Y7H0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
HLA-DQA1Q5Y7H0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQA1Q5Y7H0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.55■□□□□ 0.72
HLA-DQA1Q5Y7H0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQA1Q5Y7H0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQA1Q5Y7H0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQA1Q5Y7H0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQA1Q5Y7H0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQA1Q5Y7H0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms