Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
USH1GQ495M9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
USH1GQ495M9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
USH1GQ495M9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
USH1GQ495M9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
USH1GQ495M9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
USH1GQ495M9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
USH1GQ495M9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
USH1GQ495M9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC24.19■■□□□ 1.46
USH1GQ495M9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC24.19■■□□□ 1.46
USH1GQ495M9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.19■■□□□ 1.46
USH1GQ495M9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.19■■□□□ 1.46
USH1GQ495M9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.19■■□□□ 1.46
USH1GQ495M9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
USH1GQ495M9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
USH1GQ495M9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24.19■■□□□ 1.46
USH1GQ495M9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC24.19■■□□□ 1.46
USH1GQ495M9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC24.19■■□□□ 1.46
USH1GQ495M9 AC068338.2-201ENST00000563278 1430 ntBASIC24.18■■□□□ 1.46
USH1GQ495M9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
USH1GQ495M9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
USH1GQ495M9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
USH1GQ495M9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
USH1GQ495M9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC24.18■■□□□ 1.46
USH1GQ495M9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
USH1GQ495M9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
USH1GQ495M9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
USH1GQ495M9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.18■■□□□ 1.46
USH1GQ495M9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
USH1GQ495M9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
USH1GQ495M9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC24.17■■□□□ 1.46
USH1GQ495M9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC24.17■■□□□ 1.46
USH1GQ495M9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
USH1GQ495M9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
USH1GQ495M9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
USH1GQ495M9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
USH1GQ495M9 CYP2T1P-201ENST00000432607 1285 ntBASIC24.17■■□□□ 1.46
USH1GQ495M9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC24.17■■□□□ 1.46
USH1GQ495M9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
USH1GQ495M9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
USH1GQ495M9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
USH1GQ495M9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC24.17■■□□□ 1.46
USH1GQ495M9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC24.17■■□□□ 1.46
USH1GQ495M9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
USH1GQ495M9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC24.16■■□□□ 1.46
USH1GQ495M9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
USH1GQ495M9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
USH1GQ495M9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC24.16■■□□□ 1.46
USH1GQ495M9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.16■■□□□ 1.46
USH1GQ495M9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC24.16■■□□□ 1.46
USH1GQ495M9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.16■■□□□ 1.46
USH1GQ495M9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
USH1GQ495M9 RBM17P2-201ENST00000616397 1405 ntBASIC24.16■■□□□ 1.46
USH1GQ495M9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
USH1GQ495M9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
USH1GQ495M9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC24.16■■□□□ 1.46
USH1GQ495M9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
USH1GQ495M9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
USH1GQ495M9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC24.15■■□□□ 1.46
USH1GQ495M9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
USH1GQ495M9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
USH1GQ495M9 GUSBP6-202ENST00000438529 1198 ntBASIC24.15■■□□□ 1.46
USH1GQ495M9 TSPY6P-201ENST00000448518 926 ntBASIC24.15■■□□□ 1.46
USH1GQ495M9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.15■■□□□ 1.46
USH1GQ495M9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
USH1GQ495M9 AC105036.2-201ENST00000569468 176 ntBASIC24.15■■□□□ 1.46
USH1GQ495M9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
USH1GQ495M9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC24.15■■□□□ 1.46
USH1GQ495M9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
USH1GQ495M9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
USH1GQ495M9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC24.14■■□□□ 1.46
USH1GQ495M9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
USH1GQ495M9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
USH1GQ495M9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
USH1GQ495M9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
USH1GQ495M9 AC007322.4-201ENST00000509611 723 ntBASIC24.14■■□□□ 1.45
USH1GQ495M9 AF201337.1-201ENST00000520239 748 ntBASIC24.14■■□□□ 1.45
USH1GQ495M9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
USH1GQ495M9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
USH1GQ495M9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC24.14■■□□□ 1.45
USH1GQ495M9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC24.14■■□□□ 1.45
USH1GQ495M9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC24.13■■□□□ 1.45
USH1GQ495M9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
USH1GQ495M9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
USH1GQ495M9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.13■■□□□ 1.45
USH1GQ495M9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
USH1GQ495M9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
USH1GQ495M9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
USH1GQ495M9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
USH1GQ495M9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC24.13■■□□□ 1.45
USH1GQ495M9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
USH1GQ495M9 AL117328.2-201ENST00000624617 1940 ntBASIC24.13■■□□□ 1.45
USH1GQ495M9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
USH1GQ495M9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
USH1GQ495M9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
USH1GQ495M9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC24.12■■□□□ 1.45
USH1GQ495M9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
USH1GQ495M9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
USH1GQ495M9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.12■■□□□ 1.45
USH1GQ495M9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms