Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
CDH17Q12864 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.23■□□□□ 0.99
CDH17Q12864 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CDH17Q12864 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
CDH17Q12864 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CDH17Q12864 EEF1DP3-203ENST00000566025 782 ntBASIC21.23■□□□□ 0.99
CDH17Q12864 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.23■□□□□ 0.99
CDH17Q12864 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CDH17Q12864 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDH17Q12864 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH17Q12864 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.23■□□□□ 0.99
CDH17Q12864 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH17Q12864 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH17Q12864 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDH17Q12864 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH17Q12864 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH17Q12864 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDH17Q12864 AC053503.5-201ENST00000601508 636 ntBASIC21.22■□□□□ 0.99
CDH17Q12864 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH17Q12864 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.22■□□□□ 0.99
CDH17Q12864 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH17Q12864 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.22■□□□□ 0.99
CDH17Q12864 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH17Q12864 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH17Q12864 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH17Q12864 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.21■□□□□ 0.99
CDH17Q12864 AC027612.3-201ENST00000413684 1047 ntBASIC21.21■□□□□ 0.99
CDH17Q12864 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.21■□□□□ 0.99
CDH17Q12864 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.21■□□□□ 0.99
CDH17Q12864 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH17Q12864 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH17Q12864 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.21■□□□□ 0.99
CDH17Q12864 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH17Q12864 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
CDH17Q12864 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CDH17Q12864 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH17Q12864 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CDH17Q12864 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH17Q12864 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH17Q12864 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH17Q12864 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH17Q12864 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH17Q12864 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDH17Q12864 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CDH17Q12864 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
CDH17Q12864 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH17Q12864 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH17Q12864 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.2■□□□□ 0.98
CDH17Q12864 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH17Q12864 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CDH17Q12864 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CDH17Q12864 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.2■□□□□ 0.98
CDH17Q12864 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDH17Q12864 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CDH17Q12864 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH17Q12864 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.19■□□□□ 0.98
CDH17Q12864 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.19■□□□□ 0.98
CDH17Q12864 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH17Q12864 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.19■□□□□ 0.98
CDH17Q12864 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH17Q12864 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH17Q12864 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH17Q12864 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH17Q12864 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.19■□□□□ 0.98
CDH17Q12864 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH17Q12864 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH17Q12864 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH17Q12864 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.19■□□□□ 0.98
CDH17Q12864 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH17Q12864 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH17Q12864 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH17Q12864 AC079140.4-201ENST00000507448 529 ntBASIC21.18■□□□□ 0.98
CDH17Q12864 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.18■□□□□ 0.98
CDH17Q12864 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CDH17Q12864 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.18■□□□□ 0.98
CDH17Q12864 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.18■□□□□ 0.98
CDH17Q12864 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CDH17Q12864 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH17Q12864 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH17Q12864 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDH17Q12864 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CDH17Q12864 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.17■□□□□ 0.98
CDH17Q12864 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.17■□□□□ 0.98
CDH17Q12864 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDH17Q12864 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH17Q12864 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
CDH17Q12864 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH17Q12864 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH17Q12864 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH17Q12864 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH17Q12864 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDH17Q12864 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.16■□□□□ 0.98
CDH17Q12864 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.16■□□□□ 0.98
CDH17Q12864 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH17Q12864 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CDH17Q12864 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDH17Q12864 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDH17Q12864 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CDH17Q12864 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDH17Q12864 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms