Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 YRM1YOR172W 2361 nt3.59□□□□□ -1.83
HRD3Q05787 YER165C-AYER165C-A 357 nt3.59□□□□□ -1.83
HRD3Q05787 YGL074CYGL074C 327 nt3.59□□□□□ -1.83
HRD3Q05787 GOS1YHL031C 672 nt3.59□□□□□ -1.83
HRD3Q05787 TIM10YHR005C-A 282 nt3.59□□□□□ -1.83
HRD3Q05787 SRP21YKL122C 504 nt3.59□□□□□ -1.83
HRD3Q05787 PAM18YLR008C 507 nt3.59□□□□□ -1.83
HRD3Q05787 RPL22AYLR061W 366 nt3.59□□□□□ -1.83
HRD3Q05787 YLR334CYLR334C 381 nt3.59□□□□□ -1.83
HRD3Q05787 UBX4YMR067C 1251 nt3.59□□□□□ -1.83
HRD3Q05787 IMP4YNL075W 873 nt3.59□□□□□ -1.83
HRD3Q05787 YPR170CYPR170C 336 nt3.59□□□□□ -1.83
HRD3Q05787 YPR170W-AYPR170W-A 186 nt3.59□□□□□ -1.83
HRD3Q05787 YBR141W-AYBR141W-A 96 nt3.59□□□□□ -1.83
HRD3Q05787 APD1YBR151W 951 nt3.59□□□□□ -1.83
HRD3Q05787 FYV5YCL058C 459 nt3.59□□□□□ -1.83
HRD3Q05787 ZDS1YMR273C 2748 nt3.59□□□□□ -1.83
HRD3Q05787 YML096WYML096W 1578 nt3.59□□□□□ -1.84
HRD3Q05787 KRE5YOR336W 4098 nt3.59□□□□□ -1.84
HRD3Q05787 YOL019WYOL019W 1656 nt3.59□□□□□ -1.84
HRD3Q05787 VAB2YEL005C 849 nt3.58□□□□□ -1.84
HRD3Q05787 YGR045CYGR045C 363 nt3.58□□□□□ -1.84
HRD3Q05787 CIC1YHR052W 1131 nt3.58□□□□□ -1.84
HRD3Q05787 YIL029CYIL029C 429 nt3.58□□□□□ -1.84
HRD3Q05787 YIL068W-AYIL068W-A 384 nt3.58□□□□□ -1.84
HRD3Q05787 YKL070WYKL070W 510 nt3.58□□□□□ -1.84
HRD3Q05787 YLL044WYLL044W 447 nt3.58□□□□□ -1.84
HRD3Q05787 BUR2YLR226W 1188 nt3.58□□□□□ -1.84
HRD3Q05787 YHC1YLR298C 696 nt3.58□□□□□ -1.84
HRD3Q05787 RAD14YMR201C 1116 nt3.58□□□□□ -1.84
HRD3Q05787 YNL235CYNL235C 432 nt3.58□□□□□ -1.84
HRD3Q05787 YOL019W-AYOL019W-A 153 nt3.58□□□□□ -1.84
HRD3Q05787 YPL261CYPL261C 309 nt3.58□□□□□ -1.84
HRD3Q05787 YPR012WYPR012W 255 nt3.58□□□□□ -1.84
HRD3Q05787 RRG8YPR116W 834 nt3.58□□□□□ -1.84
HRD3Q05787 SUS1YBR111W-A 291 nt3.58□□□□□ -1.84
HRD3Q05787 RNR1YER070W 2667 nt3.58□□□□□ -1.84
HRD3Q05787 STE24YJR117W 1362 nt3.58□□□□□ -1.84
HRD3Q05787 CIT1YNR001C 1440 nt3.58□□□□□ -1.84
HRD3Q05787 GLC3YEL011W 2115 nt3.58□□□□□ -1.84
HRD3Q05787 NAT1YDL040C 2565 nt3.57□□□□□ -1.84
HRD3Q05787 RSF2YJR127C 4143 nt3.57□□□□□ -1.84
HRD3Q05787 DUN1YDL101C 1542 nt3.57□□□□□ -1.84
HRD3Q05787 RRP42YDL111C 798 nt3.57□□□□□ -1.84
HRD3Q05787 YFR010W-AYFR010W-A 189 nt3.57□□□□□ -1.84
HRD3Q05787 RSC1YGR056W 2787 nt3.57□□□□□ -1.84
HRD3Q05787 SPT23YKL020C 3249 nt3.57□□□□□ -1.84
HRD3Q05787 YLR257WYLR257W 966 nt3.57□□□□□ -1.84
HRD3Q05787 SEN15YMR059W 387 nt3.57□□□□□ -1.84
HRD3Q05787 RIM11YMR139W 1113 nt3.57□□□□□ -1.84
HRD3Q05787 MRPL44YMR225C 297 nt3.57□□□□□ -1.84
HRD3Q05787 MSN1YOL116W 1149 nt3.57□□□□□ -1.84
HRD3Q05787 ATX2YOR079C 942 nt3.57□□□□□ -1.84
HRD3Q05787 YOR192C-AYOR192C-A 1317 nt3.57□□□□□ -1.84
HRD3Q05787 YOR343W-AYOR343W-A 1317 nt3.57□□□□□ -1.84
HRD3Q05787 SPO23YBR250W 1572 nt3.57□□□□□ -1.84
HRD3Q05787 IMH1YLR309C 2736 nt3.57□□□□□ -1.84
HRD3Q05787 RAD54YGL163C 2697 nt3.57□□□□□ -1.84
HRD3Q05787 AEP1YMR064W 1557 nt3.56□□□□□ -1.84
HRD3Q05787 AVT7YIL088C 1473 nt3.56□□□□□ -1.84
HRD3Q05787 RPO31YOR116C 4383 nt3.56□□□□□ -1.84
HRD3Q05787 NSA1YGL111W 1392 nt3.56□□□□□ -1.84
HRD3Q05787 YDR118W-AYDR118W-A 117 nt3.56□□□□□ -1.84
HRD3Q05787 YDR157WYDR157W 402 nt3.56□□□□□ -1.84
HRD3Q05787 MIG3YER028C 1185 nt3.56□□□□□ -1.84
HRD3Q05787 YGR018CYGR018C 330 nt3.56□□□□□ -1.84
HRD3Q05787 SNX4YJL036W 1272 nt3.56□□□□□ -1.84
HRD3Q05787 YNL276CYNL276C 396 nt3.56□□□□□ -1.84
HRD3Q05787 PGS1YCL004W 1566 nt3.55□□□□□ -1.84
HRD3Q05787 FUS2YMR232W 2034 nt3.55□□□□□ -1.84
HRD3Q05787 BUD5YCR038C 1929 nt3.55□□□□□ -1.84
HRD3Q05787 MFA1YDR461W 111 nt3.55□□□□□ -1.84
HRD3Q05787 SLD5YDR489W 885 nt3.55□□□□□ -1.84
HRD3Q05787 YER084W-AYER084W-A 513 nt3.55□□□□□ -1.84
HRD3Q05787 SDL1YIL167W 633 nt3.55□□□□□ -1.84
HRD3Q05787 EMC2YJR088C 879 nt3.55□□□□□ -1.84
HRD3Q05787 ECM4YKR076W 1113 nt3.55□□□□□ -1.84
HRD3Q05787 SYM1YLR251W 594 nt3.55□□□□□ -1.84
HRD3Q05787 YLR252WYLR252W 306 nt3.55□□□□□ -1.84
HRD3Q05787 YML053CYML053C 639 nt3.55□□□□□ -1.84
HRD3Q05787 FRM2YCL026C-A 582 nt3.55□□□□□ -1.84
HRD3Q05787 AFR1YDR085C 1863 nt3.55□□□□□ -1.84
HRD3Q05787 PMT6YGR199W 2280 nt3.55□□□□□ -1.84
HRD3Q05787 SHQ1YIL104C 1524 nt3.54□□□□□ -1.84
HRD3Q05787 PSP1YDR505C 2526 nt3.54□□□□□ -1.84
HRD3Q05787 PPH3YDR075W 927 nt3.54□□□□□ -1.84
HRD3Q05787 YDR199WYDR199W 366 nt3.54□□□□□ -1.84
HRD3Q05787 RIM4YHL024W 2142 nt3.54□□□□□ -1.84
HRD3Q05787 YHR213WYHR213W 597 nt3.54□□□□□ -1.84
HRD3Q05787 YAR062WYAR062W 597 nt3.54□□□□□ -1.84
HRD3Q05787 ILV5YLR355C 1188 nt3.54□□□□□ -1.84
HRD3Q05787 AIM36YMR157C 768 nt3.54□□□□□ -1.84
HRD3Q05787 PAI3YMR174C 207 nt3.54□□□□□ -1.84
HRD3Q05787 STP1YDR463W 1560 nt3.54□□□□□ -1.84
HRD3Q05787 TMA64YDR117C 1698 nt3.53□□□□□ -1.84
HRD3Q05787 snR68snR68 136 nt3.53□□□□□ -1.84
HRD3Q05787 BI2Q0110 1272 nt3.53□□□□□ -1.84
HRD3Q05787 YJL119CYJL119C 324 nt3.53□□□□□ -1.84
HRD3Q05787 ENT3YJR125C 1227 nt3.53□□□□□ -1.84
HRD3Q05787 YLR154W-FYLR154W-F 141 nt3.53□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms