Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 MNN4YKL201C 3537 nt4.63□□□□□ -1.67 RIP-Chip
UBP3Q01477 JHD2YJR119C 2187 nt4.63□□□□□ -1.67
UBP3Q01477 GPI1YGR216C 1830 nt4.62□□□□□ -1.67
UBP3Q01477 VID27YNL212W 2349 nt4.62□□□□□ -1.67
UBP3Q01477 DBP3YGL078C 1572 nt4.62□□□□□ -1.67
UBP3Q01477 YER046W-AYER046W-A 330 nt4.62□□□□□ -1.67
UBP3Q01477 SDL1YIL167W 633 nt4.62□□□□□ -1.67
UBP3Q01477 PBI2YNL015W 228 nt4.62□□□□□ -1.67
UBP3Q01477 GPI15YNL038W 690 nt4.62□□□□□ -1.67 RIP-Chip
UBP3Q01477 YNL057WYNL057W 333 nt4.62□□□□□ -1.67
UBP3Q01477 YOR022CYOR022C 2148 nt4.62□□□□□ -1.67
UBP3Q01477 YPR197CYPR197C 564 nt4.62□□□□□ -1.67
UBP3Q01477 YCL022CYCL022C 516 nt4.62□□□□□ -1.67
UBP3Q01477 MCP2YLR253W 1710 nt4.62□□□□□ -1.67
UBP3Q01477 KIC1YHR102W 3243 nt4.62□□□□□ -1.67
UBP3Q01477 RAD52YML032C 1416 nt4.62□□□□□ -1.67
UBP3Q01477 SEN1YLR430W 6696 nt4.61□□□□□ -1.67
UBP3Q01477 BUD13YGL174W 801 nt4.61□□□□□ -1.67 RIP-Chip
UBP3Q01477 YJL119CYJL119C 324 nt4.61□□□□□ -1.67
UBP3Q01477 TPK3YKL166C 1197 nt4.61□□□□□ -1.67
UBP3Q01477 NKP2YLR315W 462 nt4.61□□□□□ -1.67
UBP3Q01477 VHR1YIL056W 1923 nt4.61□□□□□ -1.67
UBP3Q01477 YOL153CYOL153C 1746 nt4.6□□□□□ -1.67
UBP3Q01477 XKS1YGR194C 1803 nt4.6□□□□□ -1.67
UBP3Q01477 PHM7YOL084W 2976 nt4.6□□□□□ -1.67 RIP-Chip
UBP3Q01477 CDC50YCR094W 1176 nt4.6□□□□□ -1.67
UBP3Q01477 RPS29BYDL061C 171 nt4.6□□□□□ -1.67
UBP3Q01477 YPD1YDL235C 504 nt4.6□□□□□ -1.67
UBP3Q01477 VAB2YEL005C 849 nt4.6□□□□□ -1.67
UBP3Q01477 YER068C-AYER068C-A 432 nt4.6□□□□□ -1.67
UBP3Q01477 YGL088WYGL088W 366 nt4.6□□□□□ -1.67
UBP3Q01477 YHL048C-AYHL048C-A 135 nt4.6□□□□□ -1.67
UBP3Q01477 YIL021C-AYIL021C-A 270 nt4.6□□□□□ -1.67
UBP3Q01477 YKL083WYKL083W 615 nt4.6□□□□□ -1.67
UBP3Q01477 YNL181WYNL181W 1224 nt4.6□□□□□ -1.67 RIP-Chip
UBP3Q01477 RRP42YDL111C 798 nt4.59□□□□□ -1.67
UBP3Q01477 RPA14YDR156W 414 nt4.59□□□□□ -1.67
UBP3Q01477 NCB2YDR397C 441 nt4.59□□□□□ -1.67
UBP3Q01477 YFR010W-AYFR010W-A 189 nt4.59□□□□□ -1.67
UBP3Q01477 FMP46YKR049C 402 nt4.59□□□□□ -1.67
UBP3Q01477 RAD33YML011C 534 nt4.59□□□□□ -1.67
UBP3Q01477 CMC2YBL059C-A 330 nt4.59□□□□□ -1.67
UBP3Q01477 HMG1YML075C 3165 nt4.59□□□□□ -1.68
UBP3Q01477 ARP5YNL059C 2268 nt4.58□□□□□ -1.68
UBP3Q01477 YHR214C-CYHR214C-C 1437 nt4.58□□□□□ -1.68
UBP3Q01477 CDC40YDR364C 1368 nt4.58□□□□□ -1.68 RIP-Chip
UBP3Q01477 RPL27BYDR471W 411 nt4.58□□□□□ -1.68
UBP3Q01477 FAR7YFR008W 666 nt4.58□□□□□ -1.68
UBP3Q01477 ECL1YGR146C 636 nt4.58□□□□□ -1.68
UBP3Q01477 YGR228WYGR228W 345 nt4.58□□□□□ -1.68
UBP3Q01477 YKT6YKL196C 603 nt4.58□□□□□ -1.68
UBP3Q01477 FLD1YLR404W 858 nt4.58□□□□□ -1.68
UBP3Q01477 YMR153C-AYMR153C-A 336 nt4.58□□□□□ -1.68
UBP3Q01477 VIP1YLR410W 3441 nt4.58□□□□□ -1.68
UBP3Q01477 PIN4YBL051C 2007 nt4.58□□□□□ -1.68
UBP3Q01477 ISM1YPL040C 3009 nt4.58□□□□□ -1.68
UBP3Q01477 YKL050CYKL050C 2769 nt4.58□□□□□ -1.68
UBP3Q01477 HOYDL227C 1761 nt4.58□□□□□ -1.68
UBP3Q01477 VPS9YML097C 1356 nt4.57□□□□□ -1.68 RIP-Chip
UBP3Q01477 DAS1YJL149W 1992 nt4.57□□□□□ -1.68
UBP3Q01477 SDC1YDR469W 528 nt4.57□□□□□ -1.68
UBP3Q01477 SEC4YFL005W 648 nt4.57□□□□□ -1.68
UBP3Q01477 BNA6YFR047C 888 nt4.57□□□□□ -1.68
UBP3Q01477 SAE2YGL175C 1038 nt4.57□□□□□ -1.68
UBP3Q01477 POG1YIL122W 1056 nt4.57□□□□□ -1.68
UBP3Q01477 ARG80YMR042W 534 nt4.57□□□□□ -1.68
UBP3Q01477 YOR203WYOR203W 354 nt4.57□□□□□ -1.68
UBP3Q01477 MSS18YPR134W 807 nt4.57□□□□□ -1.68
UBP3Q01477 SUS1YBR111W-A 291 nt4.57□□□□□ -1.68
UBP3Q01477 NRP1YDL167C 2160 nt4.57□□□□□ -1.68
UBP3Q01477 15S_rRNA15S_rRNA 1649 nt4.57□□□□□ -1.68
UBP3Q01477 SMI1YGR229C 1518 nt4.56□□□□□ -1.68
UBP3Q01477 CYM1YDR430C 2970 nt4.56□□□□□ -1.68
UBP3Q01477 GCR1YPL075W 2358 nt4.56□□□□□ -1.68
UBP3Q01477 EBS1YDR206W 2655 nt4.56□□□□□ -1.68
UBP3Q01477 CGR1YGL029W 363 nt4.56□□□□□ -1.68 RIP-Chip
UBP3Q01477 RAD27YKL113C 1149 nt4.56□□□□□ -1.68 RIP-Chip
UBP3Q01477 YBL010CYBL010C 843 nt4.56□□□□□ -1.68
UBP3Q01477 INN1YNL152W 1230 nt4.56□□□□□ -1.68
UBP3Q01477 TRS85YDR108W 2097 nt4.56□□□□□ -1.68 RIP-Chip
UBP3Q01477 RPG1YBR079C 2895 nt4.56□□□□□ -1.68
UBP3Q01477 ASI1YMR119W 1875 nt4.56□□□□□ -1.68
UBP3Q01477 FOX2YKR009C 2703 nt4.55□□□□□ -1.68
UBP3Q01477 snR68snR68 136 nt4.55□□□□□ -1.68
UBP3Q01477 RSM24YDR175C 960 nt4.55□□□□□ -1.68
UBP3Q01477 CHZ1YER030W 462 nt4.55□□□□□ -1.68
UBP3Q01477 YIL175WYIL175W 318 nt4.55□□□□□ -1.68
UBP3Q01477 YAL004WYAL004W 648 nt4.55□□□□□ -1.68
UBP3Q01477 YJL127C-BYJL127C-B 159 nt4.55□□□□□ -1.68
UBP3Q01477 MCR1YKL150W 909 nt4.55□□□□□ -1.68
UBP3Q01477 CNB1YKL190W 528 nt4.55□□□□□ -1.68
UBP3Q01477 ATG10YLL042C 504 nt4.55□□□□□ -1.68
UBP3Q01477 YOR053WYOR053W 342 nt4.55□□□□□ -1.68
UBP3Q01477 APL4YPR029C 2499 nt4.55□□□□□ -1.68
UBP3Q01477 PEP7YDR323C 1548 nt4.55□□□□□ -1.68
UBP3Q01477 YCR023CYCR023C 1836 nt4.55□□□□□ -1.68 RIP-Chip
UBP3Q01477 YLR152CYLR152C 1731 nt4.55□□□□□ -1.68 RIP-Chip
UBP3Q01477 EGT2YNL327W 3126 nt4.55□□□□□ -1.68 RIP-Chip
UBP3Q01477 YJL049WYJL049W 1353 nt4.54□□□□□ -1.68 RIP-Chip
UBP3Q01477 PSY4YBL046W 1326 nt4.54□□□□□ -1.68
Retrieved 100 of 7,029 protein–RNA pairs in 30.2 ms