Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
AP1S1P61966 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.23■□□□□ 0.99
AP1S1P61966 SLC7A5P2-201ENST00000553010 536 ntBASIC21.23■□□□□ 0.99
AP1S1P61966 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.23■□□□□ 0.99
AP1S1P61966 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.23■□□□□ 0.99
AP1S1P61966 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.23■□□□□ 0.99
AP1S1P61966 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
AP1S1P61966 LINC00565-201ENST00000562710 2331 ntBASIC21.23■□□□□ 0.99
AP1S1P61966 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.23■□□□□ 0.99
AP1S1P61966 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
AP1S1P61966 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
AP1S1P61966 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.22■□□□□ 0.99
AP1S1P61966 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.22■□□□□ 0.99
AP1S1P61966 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP1S1P61966 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP1S1P61966 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP1S1P61966 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
AP1S1P61966 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
AP1S1P61966 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.22■□□□□ 0.99
AP1S1P61966 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.22■□□□□ 0.99
AP1S1P61966 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
AP1S1P61966 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP1S1P61966 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
AP1S1P61966 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP1S1P61966 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
AP1S1P61966 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP1S1P61966 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
AP1S1P61966 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP1S1P61966 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.22■□□□□ 0.99
AP1S1P61966 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
AP1S1P61966 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP1S1P61966 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.21■□□□□ 0.99
AP1S1P61966 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.21■□□□□ 0.99
AP1S1P61966 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP1S1P61966 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.21■□□□□ 0.99
AP1S1P61966 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
AP1S1P61966 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.21■□□□□ 0.99
AP1S1P61966 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
AP1S1P61966 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
AP1S1P61966 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.21■□□□□ 0.99
AP1S1P61966 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP1S1P61966 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.21■□□□□ 0.99
AP1S1P61966 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
AP1S1P61966 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
AP1S1P61966 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
AP1S1P61966 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP1S1P61966 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP1S1P61966 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP1S1P61966 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.2■□□□□ 0.98
AP1S1P61966 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
AP1S1P61966 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
AP1S1P61966 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP1S1P61966 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.2■□□□□ 0.98
AP1S1P61966 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.2■□□□□ 0.98
AP1S1P61966 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP1S1P61966 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.2■□□□□ 0.98
AP1S1P61966 BID-214ENST00000617586 542 ntTSL 5 BASIC21.2■□□□□ 0.98
AP1S1P61966 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
AP1S1P61966 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
AP1S1P61966 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP1S1P61966 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP1S1P61966 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
AP1S1P61966 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
AP1S1P61966 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.2■□□□□ 0.98
AP1S1P61966 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
AP1S1P61966 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.2■□□□□ 0.98
AP1S1P61966 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
AP1S1P61966 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
AP1S1P61966 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP1S1P61966 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
AP1S1P61966 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.19■□□□□ 0.98
AP1S1P61966 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.19■□□□□ 0.98
AP1S1P61966 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.19■□□□□ 0.98
AP1S1P61966 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.19■□□□□ 0.98
AP1S1P61966 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP1S1P61966 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP1S1P61966 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP1S1P61966 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP1S1P61966 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP1S1P61966 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.18■□□□□ 0.98
AP1S1P61966 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
AP1S1P61966 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP1S1P61966 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
AP1S1P61966 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.18■□□□□ 0.98
AP1S1P61966 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
AP1S1P61966 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.18■□□□□ 0.98
AP1S1P61966 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.18■□□□□ 0.98
AP1S1P61966 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.18■□□□□ 0.98
AP1S1P61966 MFSD11-216ENST00000590393 1141 ntBASIC21.18■□□□□ 0.98
AP1S1P61966 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.18■□□□□ 0.98
AP1S1P61966 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.18■□□□□ 0.98
AP1S1P61966 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
AP1S1P61966 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
AP1S1P61966 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP1S1P61966 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP1S1P61966 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP1S1P61966 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP1S1P61966 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP1S1P61966 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.18■□□□□ 0.98
AP1S1P61966 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms