Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.92
EIF4A1P60842 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC27.07■■□□□ 1.92
EIF4A1P60842 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
EIF4A1P60842 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
EIF4A1P60842 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC27.07■■□□□ 1.92
EIF4A1P60842 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC27.07■■□□□ 1.92
EIF4A1P60842 AL591742.1-201ENST00000604433 565 ntBASIC27.07■■□□□ 1.92
EIF4A1P60842 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC27.07■■□□□ 1.92
EIF4A1P60842 PFKL-212ENST00000628044 129 ntTSL 3 BASIC27.07■■□□□ 1.92
EIF4A1P60842 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
EIF4A1P60842 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
EIF4A1P60842 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC27.07■■□□□ 1.92
EIF4A1P60842 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
EIF4A1P60842 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC27.07■■□□□ 1.92
EIF4A1P60842 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
EIF4A1P60842 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC27.06■■□□□ 1.92
EIF4A1P60842 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC27.06■■□□□ 1.92
EIF4A1P60842 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
EIF4A1P60842 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
EIF4A1P60842 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
EIF4A1P60842 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
EIF4A1P60842 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
EIF4A1P60842 AL512625.2-201ENST00000417533 625 ntBASIC27.06■■□□□ 1.92
EIF4A1P60842 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC27.06■■□□□ 1.92
EIF4A1P60842 AL162412.1-201ENST00000567129 965 ntBASIC27.06■■□□□ 1.92
EIF4A1P60842 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC27.06■■□□□ 1.92
EIF4A1P60842 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
EIF4A1P60842 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
EIF4A1P60842 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
EIF4A1P60842 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC27.05■■□□□ 1.92
EIF4A1P60842 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
EIF4A1P60842 ECEL1P1-201ENST00000373592 1742 ntBASIC27.05■■□□□ 1.92
EIF4A1P60842 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
EIF4A1P60842 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
EIF4A1P60842 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
EIF4A1P60842 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC27.05■■□□□ 1.92
EIF4A1P60842 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC27.05■■□□□ 1.92
EIF4A1P60842 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
EIF4A1P60842 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
EIF4A1P60842 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
EIF4A1P60842 ME2-206ENST00000638410 2289 ntTSL 5 BASIC27.05■■□□□ 1.92
EIF4A1P60842 ME2-210ENST00000639255 2262 ntTSL 5 BASIC27.05■■□□□ 1.92
EIF4A1P60842 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
EIF4A1P60842 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC27.04■■□□□ 1.92
EIF4A1P60842 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
EIF4A1P60842 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
EIF4A1P60842 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
EIF4A1P60842 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
EIF4A1P60842 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
EIF4A1P60842 AC091799.1-201ENST00000422823 811 ntBASIC27.04■■□□□ 1.92
EIF4A1P60842 AC073210.2-201ENST00000430369 194 ntBASIC27.04■■□□□ 1.92
EIF4A1P60842 AC069152.1-201ENST00000438030 544 ntBASIC27.04■■□□□ 1.92
EIF4A1P60842 CD44-222ENST00000526025 1052 ntTSL 2 BASIC27.04■■□□□ 1.92
EIF4A1P60842 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC27.04■■□□□ 1.92
EIF4A1P60842 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
EIF4A1P60842 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC27.04■■□□□ 1.92
EIF4A1P60842 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC27.04■■□□□ 1.92
EIF4A1P60842 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
EIF4A1P60842 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
EIF4A1P60842 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
EIF4A1P60842 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
EIF4A1P60842 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
EIF4A1P60842 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
EIF4A1P60842 STX5-203ENST00000394690 1568 ntTSL 5 BASIC27.03■■□□□ 1.92
EIF4A1P60842 MIPEPP3-201ENST00000412105 444 ntBASIC27.03■■□□□ 1.92
EIF4A1P60842 MKRN4P-201ENST00000444706 1521 ntBASIC27.03■■□□□ 1.92
EIF4A1P60842 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC27.03■■□□□ 1.92
EIF4A1P60842 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC27.03■■□□□ 1.92
EIF4A1P60842 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC27.03■■□□□ 1.92
EIF4A1P60842 AC069236.1-201ENST00000604339 616 ntBASIC27.03■■□□□ 1.92
EIF4A1P60842 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
EIF4A1P60842 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
EIF4A1P60842 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
EIF4A1P60842 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC27.02■■□□□ 1.92
EIF4A1P60842 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC27.02■■□□□ 1.92
EIF4A1P60842 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
EIF4A1P60842 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
EIF4A1P60842 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
EIF4A1P60842 LSR-203ENST00000360798 1963 ntTSL 2 BASIC27.02■■□□□ 1.92
EIF4A1P60842 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
EIF4A1P60842 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
EIF4A1P60842 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
EIF4A1P60842 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
EIF4A1P60842 RARRES2P4-201ENST00000514074 484 ntBASIC27.01■■□□□ 1.91
EIF4A1P60842 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC27.01■■□□□ 1.91
EIF4A1P60842 PHB2-213ENST00000546111 858 ntTSL 2 BASIC27.01■■□□□ 1.91
EIF4A1P60842 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC27.01■■□□□ 1.91
EIF4A1P60842 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC27.01■■□□□ 1.91
EIF4A1P60842 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
EIF4A1P60842 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC27■■□□□ 1.91
EIF4A1P60842 AC008694.1-202ENST00000636953 945 ntBASIC27■■□□□ 1.91
EIF4A1P60842 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
EIF4A1P60842 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC27■■□□□ 1.91
EIF4A1P60842 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
EIF4A1P60842 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
EIF4A1P60842 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
EIF4A1P60842 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
EIF4A1P60842 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC26.99■■□□□ 1.91
EIF4A1P60842 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC26.99■■□□□ 1.91
EIF4A1P60842 AC133041.1-202ENST00000642053 222 ntBASIC26.99■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms