Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN12P56749 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN12P56749 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN12P56749 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN12P56749 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN12P56749 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN12P56749 GABARAPL3-202ENST00000624044 1851 ntBASIC18.24■□□□□ 0.51
CLDN12P56749 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN12P56749 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN12P56749 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN12P56749 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN12P56749 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN12P56749 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CLDN12P56749 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN12P56749 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CLDN12P56749 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN12P56749 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN12P56749 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN12P56749 PLK5-205ENST00000642079 1969 ntBASIC18.23■□□□□ 0.51
CLDN12P56749 AC006128.1-201ENST00000624704 1661 ntBASIC18.23■□□□□ 0.51
CLDN12P56749 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN12P56749 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN12P56749 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN12P56749 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN12P56749 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN12P56749 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN12P56749 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN12P56749 AC068587.7-201ENST00000641602 218 ntBASIC18.23■□□□□ 0.51
CLDN12P56749 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN12P56749 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN12P56749 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN12P56749 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
CLDN12P56749 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN12P56749 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CLDN12P56749 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.22■□□□□ 0.51
CLDN12P56749 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN12P56749 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN12P56749 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN12P56749 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
CLDN12P56749 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CLDN12P56749 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN12P56749 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN12P56749 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN12P56749 AC010141.3-201ENST00000456659 717 ntBASIC18.22■□□□□ 0.51
CLDN12P56749 AC099791.2-201ENST00000605725 427 ntBASIC18.22■□□□□ 0.51
CLDN12P56749 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN12P56749 AC087239.1-201ENST00000622671 572 ntBASIC18.22■□□□□ 0.51
CLDN12P56749 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN12P56749 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN12P56749 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN12P56749 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CLDN12P56749 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN12P56749 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN12P56749 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN12P56749 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN12P56749 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN12P56749 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN12P56749 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CLDN12P56749 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.21■□□□□ 0.51
CLDN12P56749 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CLDN12P56749 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN12P56749 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CLDN12P56749 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN12P56749 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN12P56749 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN12P56749 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN12P56749 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CLDN12P56749 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN12P56749 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN12P56749 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CLDN12P56749 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
CLDN12P56749 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CLDN12P56749 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN12P56749 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CLDN12P56749 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CLDN12P56749 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN12P56749 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLDN12P56749 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CLDN12P56749 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN12P56749 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN12P56749 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN12P56749 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDN12P56749 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDN12P56749 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN12P56749 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN12P56749 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN12P56749 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN12P56749 AP004607.7-201ENST00000527152 1677 ntBASIC18.2■□□□□ 0.5
CLDN12P56749 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CLDN12P56749 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CLDN12P56749 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN12P56749 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN12P56749 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CLDN12P56749 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDN12P56749 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN12P56749 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN12P56749 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN12P56749 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDN12P56749 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDN12P56749 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms