Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.99■□□□□ 0.95
ZNF140P52738 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.99■□□□□ 0.95
ZNF140P52738 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF140P52738 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF140P52738 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF140P52738 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
ZNF140P52738 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF140P52738 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF140P52738 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.98■□□□□ 0.95
ZNF140P52738 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF140P52738 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.98■□□□□ 0.95
ZNF140P52738 AC034268.1-201ENST00000441047 882 ntBASIC20.98■□□□□ 0.95
ZNF140P52738 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.98■□□□□ 0.95
ZNF140P52738 RARRES2P6-201ENST00000567333 442 ntBASIC20.98■□□□□ 0.95
ZNF140P52738 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.98■□□□□ 0.95
ZNF140P52738 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ZNF140P52738 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF140P52738 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF140P52738 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF140P52738 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
ZNF140P52738 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF140P52738 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF140P52738 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.97■□□□□ 0.95
ZNF140P52738 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF140P52738 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ZNF140P52738 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF140P52738 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF140P52738 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.97■□□□□ 0.95
ZNF140P52738 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.97■□□□□ 0.95
ZNF140P52738 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.97■□□□□ 0.95
ZNF140P52738 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.97■□□□□ 0.95
ZNF140P52738 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.97■□□□□ 0.95
ZNF140P52738 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
ZNF140P52738 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.97■□□□□ 0.95
ZNF140P52738 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.97■□□□□ 0.95
ZNF140P52738 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
ZNF140P52738 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF140P52738 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF140P52738 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.96■□□□□ 0.95
ZNF140P52738 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ZNF140P52738 AL049796.1-201ENST00000565336 1766 ntBASIC20.96■□□□□ 0.95
ZNF140P52738 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.96■□□□□ 0.95
ZNF140P52738 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.96■□□□□ 0.95
ZNF140P52738 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.96■□□□□ 0.95
ZNF140P52738 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ZNF140P52738 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.96■□□□□ 0.95
ZNF140P52738 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.96■□□□□ 0.95
ZNF140P52738 AP001160.3-201ENST00000601484 763 ntBASIC20.96■□□□□ 0.95
ZNF140P52738 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ZNF140P52738 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
ZNF140P52738 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF140P52738 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ZNF140P52738 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF140P52738 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
ZNF140P52738 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF140P52738 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF140P52738 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.95■□□□□ 0.94
ZNF140P52738 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.95■□□□□ 0.94
ZNF140P52738 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ZNF140P52738 POU5F1P4-201ENST00000413175 1085 ntBASIC20.95■□□□□ 0.94
ZNF140P52738 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ZNF140P52738 AC008175.2-201ENST00000612840 297 ntBASIC20.95■□□□□ 0.94
ZNF140P52738 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF140P52738 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.95■□□□□ 0.94
ZNF140P52738 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF140P52738 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF140P52738 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.94■□□□□ 0.94
ZNF140P52738 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF140P52738 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF140P52738 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.94■□□□□ 0.94
ZNF140P52738 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
ZNF140P52738 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF140P52738 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF140P52738 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.94■□□□□ 0.94
ZNF140P52738 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF140P52738 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.94■□□□□ 0.94
ZNF140P52738 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF140P52738 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.94■□□□□ 0.94
ZNF140P52738 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF140P52738 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
ZNF140P52738 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF140P52738 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF140P52738 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF140P52738 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.93■□□□□ 0.94
ZNF140P52738 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.93■□□□□ 0.94
ZNF140P52738 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF140P52738 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.93■□□□□ 0.94
ZNF140P52738 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF140P52738 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
ZNF140P52738 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF140P52738 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ZNF140P52738 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF140P52738 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
ZNF140P52738 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF140P52738 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.93■□□□□ 0.94
ZNF140P52738 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.93■□□□□ 0.94
ZNF140P52738 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.93■□□□□ 0.94
ZNF140P52738 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF140P52738 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.93■□□□□ 0.94
ZNF140P52738 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms