Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.08■□□□□ 0.81
POLR2JP52435 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
POLR2JP52435 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.08■□□□□ 0.81
POLR2JP52435 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
POLR2JP52435 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
POLR2JP52435 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
POLR2JP52435 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
POLR2JP52435 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
POLR2JP52435 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
POLR2JP52435 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
POLR2JP52435 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
POLR2JP52435 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
POLR2JP52435 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
POLR2JP52435 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
POLR2JP52435 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
POLR2JP52435 AC092667.1-201ENST00000434301 2586 ntBASIC20.08■□□□□ 0.8
POLR2JP52435 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
POLR2JP52435 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.07■□□□□ 0.8
POLR2JP52435 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
POLR2JP52435 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR2JP52435 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
POLR2JP52435 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
POLR2JP52435 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
POLR2JP52435 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.07■□□□□ 0.8
POLR2JP52435 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
POLR2JP52435 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.07■□□□□ 0.8
POLR2JP52435 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.07■□□□□ 0.8
POLR2JP52435 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.07■□□□□ 0.8
POLR2JP52435 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.07■□□□□ 0.8
POLR2JP52435 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR2JP52435 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
POLR2JP52435 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.07■□□□□ 0.8
POLR2JP52435 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR2JP52435 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
POLR2JP52435 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR2JP52435 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR2JP52435 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2JP52435 PLK5-205ENST00000642079 1969 ntBASIC20.06■□□□□ 0.8
POLR2JP52435 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2JP52435 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2JP52435 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2JP52435 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2JP52435 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.06■□□□□ 0.8
POLR2JP52435 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2JP52435 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2JP52435 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2JP52435 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2JP52435 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2JP52435 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2JP52435 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.06■□□□□ 0.8
POLR2JP52435 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.06■□□□□ 0.8
POLR2JP52435 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.06■□□□□ 0.8
POLR2JP52435 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2JP52435 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.06■□□□□ 0.8
POLR2JP52435 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2JP52435 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2JP52435 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2JP52435 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.06■□□□□ 0.8
POLR2JP52435 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2JP52435 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.06■□□□□ 0.8
POLR2JP52435 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2JP52435 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POLR2JP52435 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.05■□□□□ 0.8
POLR2JP52435 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.05■□□□□ 0.8
POLR2JP52435 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.05■□□□□ 0.8
POLR2JP52435 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.05■□□□□ 0.8
POLR2JP52435 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.05■□□□□ 0.8
POLR2JP52435 SMUG1P1-201ENST00000590640 811 ntBASIC20.05■□□□□ 0.8
POLR2JP52435 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR2JP52435 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.05■□□□□ 0.8
POLR2JP52435 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.05■□□□□ 0.8
POLR2JP52435 GABARAPL3-202ENST00000624044 1851 ntBASIC20.05■□□□□ 0.8
POLR2JP52435 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
POLR2JP52435 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
POLR2JP52435 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
POLR2JP52435 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2JP52435 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2JP52435 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2JP52435 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2JP52435 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
POLR2JP52435 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
POLR2JP52435 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2JP52435 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2JP52435 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2JP52435 AL356441.2-201ENST00000443009 864 ntBASIC20.04■□□□□ 0.8
POLR2JP52435 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.04■□□□□ 0.8
POLR2JP52435 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2JP52435 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2JP52435 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2JP52435 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2JP52435 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2JP52435 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
POLR2JP52435 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2JP52435 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2JP52435 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2JP52435 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.04■□□□□ 0.8
POLR2JP52435 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
POLR2JP52435 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.04■□□□□ 0.8
POLR2JP52435 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
POLR2JP52435 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms