Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDR1P51861 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.87■■□□□ 1.25
CDR1P51861 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
CDR1P51861 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC22.86■■□□□ 1.25
CDR1P51861 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.86■■□□□ 1.25
CDR1P51861 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC22.86■■□□□ 1.25
CDR1P51861 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.86■■□□□ 1.25
CDR1P51861 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDR1P51861 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.86■■□□□ 1.25
CDR1P51861 AC079140.4-201ENST00000507448 529 ntBASIC22.86■■□□□ 1.25
CDR1P51861 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDR1P51861 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.86■■□□□ 1.25
CDR1P51861 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.86■■□□□ 1.25
CDR1P51861 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.86■■□□□ 1.25
CDR1P51861 RARRES2P11-201ENST00000635158 484 ntBASIC22.86■■□□□ 1.25
CDR1P51861 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.86■■□□□ 1.25
CDR1P51861 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
CDR1P51861 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
CDR1P51861 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.86■■□□□ 1.25
CDR1P51861 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.86■■□□□ 1.25
CDR1P51861 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDR1P51861 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDR1P51861 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.85■■□□□ 1.25
CDR1P51861 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
CDR1P51861 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDR1P51861 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.85■■□□□ 1.25
CDR1P51861 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC22.85■■□□□ 1.25
CDR1P51861 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDR1P51861 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.85■■□□□ 1.25
CDR1P51861 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.85■■□□□ 1.25
CDR1P51861 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.85■■□□□ 1.25
CDR1P51861 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.85■■□□□ 1.25
CDR1P51861 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDR1P51861 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.85■■□□□ 1.25
CDR1P51861 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDR1P51861 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDR1P51861 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.85■■□□□ 1.25
CDR1P51861 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDR1P51861 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDR1P51861 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.85■■□□□ 1.25
CDR1P51861 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.84■■□□□ 1.25
CDR1P51861 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.84■■□□□ 1.25
CDR1P51861 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDR1P51861 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDR1P51861 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
CDR1P51861 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDR1P51861 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDR1P51861 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
CDR1P51861 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDR1P51861 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CDR1P51861 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.84■■□□□ 1.25
CDR1P51861 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CDR1P51861 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.84■■□□□ 1.25
CDR1P51861 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDR1P51861 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.84■■□□□ 1.25
CDR1P51861 AC137761.2-201ENST00000561729 223 ntBASIC22.84■■□□□ 1.25
CDR1P51861 AC145350.3-201ENST00000569033 163 ntBASIC22.84■■□□□ 1.25
CDR1P51861 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.84■■□□□ 1.25
CDR1P51861 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC22.84■■□□□ 1.25
CDR1P51861 AL137060.1-201ENST00000618151 2648 ntBASIC22.84■■□□□ 1.25
CDR1P51861 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDR1P51861 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDR1P51861 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDR1P51861 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDR1P51861 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDR1P51861 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CDR1P51861 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CDR1P51861 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CDR1P51861 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.83■■□□□ 1.25
CDR1P51861 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC22.83■■□□□ 1.25
CDR1P51861 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CDR1P51861 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CDR1P51861 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CDR1P51861 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.83■■□□□ 1.25
CDR1P51861 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.83■■□□□ 1.25
CDR1P51861 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
CDR1P51861 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.83■■□□□ 1.25
CDR1P51861 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CDR1P51861 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
CDR1P51861 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.83■■□□□ 1.25
CDR1P51861 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CDR1P51861 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.83■■□□□ 1.24
CDR1P51861 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CDR1P51861 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CDR1P51861 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC22.82■■□□□ 1.24
CDR1P51861 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDR1P51861 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC22.82■■□□□ 1.24
CDR1P51861 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.82■■□□□ 1.24
CDR1P51861 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDR1P51861 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDR1P51861 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
CDR1P51861 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.82■■□□□ 1.24
CDR1P51861 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.82■■□□□ 1.24
CDR1P51861 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDR1P51861 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.82■■□□□ 1.24
CDR1P51861 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDR1P51861 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.82■■□□□ 1.24
CDR1P51861 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDR1P51861 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
CDR1P51861 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms