Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CLCNKAP51800 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CLCNKAP51800 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLCNKAP51800 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLCNKAP51800 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCNKAP51800 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCNKAP51800 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCNKAP51800 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLCNKAP51800 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKAP51800 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CLCNKAP51800 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKAP51800 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKAP51800 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKAP51800 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.63■□□□□ 0.89
CLCNKAP51800 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CLCNKAP51800 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKAP51800 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.63■□□□□ 0.89
CLCNKAP51800 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKAP51800 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.63■□□□□ 0.89
CLCNKAP51800 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.63■□□□□ 0.89
CLCNKAP51800 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.63■□□□□ 0.89
CLCNKAP51800 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CLCNKAP51800 AC010536.3-201ENST00000620306 533 ntBASIC20.63■□□□□ 0.89
CLCNKAP51800 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKAP51800 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKAP51800 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CLCNKAP51800 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKAP51800 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CLCNKAP51800 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKAP51800 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKAP51800 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKAP51800 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCNKAP51800 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CLCNKAP51800 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
CLCNKAP51800 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLCNKAP51800 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCNKAP51800 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCNKAP51800 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCNKAP51800 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.62■□□□□ 0.89
CLCNKAP51800 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CLCNKAP51800 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.62■□□□□ 0.89
CLCNKAP51800 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.62■□□□□ 0.89
CLCNKAP51800 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCNKAP51800 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
CLCNKAP51800 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.62■□□□□ 0.89
CLCNKAP51800 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CLCNKAP51800 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.62■□□□□ 0.89
CLCNKAP51800 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKAP51800 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKAP51800 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.61■□□□□ 0.89
CLCNKAP51800 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKAP51800 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKAP51800 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKAP51800 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKAP51800 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKAP51800 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKAP51800 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKAP51800 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.61■□□□□ 0.89
CLCNKAP51800 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.61■□□□□ 0.89
CLCNKAP51800 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.61■□□□□ 0.89
CLCNKAP51800 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKAP51800 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKAP51800 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKAP51800 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.6■□□□□ 0.89
CLCNKAP51800 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.6■□□□□ 0.89
CLCNKAP51800 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.6■□□□□ 0.89
CLCNKAP51800 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.6■□□□□ 0.89
CLCNKAP51800 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.6■□□□□ 0.89
CLCNKAP51800 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.6■□□□□ 0.89
CLCNKAP51800 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLCNKAP51800 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CLCNKAP51800 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCNKAP51800 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLCNKAP51800 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCNKAP51800 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLCNKAP51800 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CLCNKAP51800 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCNKAP51800 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CLCNKAP51800 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.59■□□□□ 0.89
CLCNKAP51800 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.59■□□□□ 0.89
CLCNKAP51800 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.59■□□□□ 0.89
CLCNKAP51800 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLCNKAP51800 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.59■□□□□ 0.89
CLCNKAP51800 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCNKAP51800 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CLCNKAP51800 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CLCNKAP51800 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLCNKAP51800 TERF1P5-201ENST00000477545 1207 ntBASIC20.59■□□□□ 0.89
CLCNKAP51800 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.59■□□□□ 0.89
CLCNKAP51800 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLCNKAP51800 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCNKAP51800 AC061975.6-201ENST00000579045 1553 ntBASIC20.59■□□□□ 0.89
CLCNKAP51800 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLCNKAP51800 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CLCNKAP51800 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCNKAP51800 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCNKAP51800 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.58■□□□□ 0.89
CLCNKAP51800 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
CLCNKAP51800 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCNKAP51800 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms