Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC079089.2-201ENST00000531211 1277 ntBASIC19.62■□□□□ 0.73
CLK1P49759 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLK1P49759 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLK1P49759 AC126544.1-201ENST00000580842 1059 ntBASIC19.62■□□□□ 0.73
CLK1P49759 AC008764.7-201ENST00000593779 1081 ntBASIC19.62■□□□□ 0.73
CLK1P49759 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLK1P49759 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.62■□□□□ 0.73
CLK1P49759 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.62■□□□□ 0.73
CLK1P49759 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLK1P49759 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
CLK1P49759 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLK1P49759 OXCT2P1-201ENST00000447263 1535 ntBASIC19.61■□□□□ 0.73
CLK1P49759 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLK1P49759 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLK1P49759 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.61■□□□□ 0.73
CLK1P49759 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLK1P49759 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLK1P49759 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLK1P49759 SUDS3P1-201ENST00000505831 966 ntBASIC19.61■□□□□ 0.73
CLK1P49759 AL031432.3-201ENST00000607698 485 ntBASIC19.61■□□□□ 0.73
CLK1P49759 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.61■□□□□ 0.73
CLK1P49759 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLK1P49759 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.61■□□□□ 0.73
CLK1P49759 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.61■□□□□ 0.73
CLK1P49759 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.61■□□□□ 0.73
CLK1P49759 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLK1P49759 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLK1P49759 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.61■□□□□ 0.73
CLK1P49759 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CLK1P49759 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CLK1P49759 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.61■□□□□ 0.73
CLK1P49759 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLK1P49759 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLK1P49759 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CLK1P49759 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.6■□□□□ 0.73
CLK1P49759 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.6■□□□□ 0.73
CLK1P49759 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLK1P49759 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLK1P49759 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLK1P49759 AC099791.1-201ENST00000416440 715 ntBASIC19.6■□□□□ 0.73
CLK1P49759 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CLK1P49759 AL136967.2-201ENST00000623968 743 ntBASIC19.6■□□□□ 0.73
CLK1P49759 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CLK1P49759 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLK1P49759 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
CLK1P49759 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK1P49759 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK1P49759 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
CLK1P49759 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK1P49759 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK1P49759 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK1P49759 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.59■□□□□ 0.73
CLK1P49759 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CLK1P49759 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK1P49759 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CLK1P49759 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLK1P49759 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK1P49759 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK1P49759 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.59■□□□□ 0.73
CLK1P49759 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.59■□□□□ 0.73
CLK1P49759 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.59■□□□□ 0.73
CLK1P49759 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.59■□□□□ 0.73
CLK1P49759 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK1P49759 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK1P49759 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
CLK1P49759 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK1P49759 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CLK1P49759 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLK1P49759 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLK1P49759 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLK1P49759 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLK1P49759 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLK1P49759 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
CLK1P49759 IGHV3-19-201ENST00000521488 291 ntBASIC19.58■□□□□ 0.72
CLK1P49759 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.58■□□□□ 0.72
CLK1P49759 AF213884.3-201ENST00000563833 479 ntBASIC19.58■□□□□ 0.72
CLK1P49759 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.58■□□□□ 0.72
CLK1P49759 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLK1P49759 AC005837.3-201ENST00000612163 286 ntBASIC19.58■□□□□ 0.72
CLK1P49759 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLK1P49759 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CLK1P49759 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLK1P49759 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CLK1P49759 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLK1P49759 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.57■□□□□ 0.72
CLK1P49759 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CLK1P49759 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.57■□□□□ 0.72
CLK1P49759 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.57■□□□□ 0.72
CLK1P49759 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLK1P49759 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CLK1P49759 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CLK1P49759 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLK1P49759 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLK1P49759 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.57■□□□□ 0.72
CLK1P49759 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.57■□□□□ 0.72
CLK1P49759 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLK1P49759 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLK1P49759 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLK1P49759 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLK1P49759 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms