Protein–RNA interactions for Protein: P48547

KCNC1, Potassium voltage-gated channel subfamily C member 1, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1P48547 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.64■□□□□ 0.89
KCNC1P48547 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
KCNC1P48547 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNC1P48547 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
KCNC1P48547 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
KCNC1P48547 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNC1P48547 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNC1P48547 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNC1P48547 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
KCNC1P48547 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
KCNC1P48547 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.63■□□□□ 0.89
KCNC1P48547 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNC1P48547 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.63■□□□□ 0.89
KCNC1P48547 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.63■□□□□ 0.89
KCNC1P48547 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.63■□□□□ 0.89
KCNC1P48547 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNC1P48547 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNC1P48547 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
KCNC1P48547 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
KCNC1P48547 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNC1P48547 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNC1P48547 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNC1P48547 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.62■□□□□ 0.89
KCNC1P48547 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNC1P48547 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNC1P48547 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
KCNC1P48547 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.62■□□□□ 0.89
KCNC1P48547 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNC1P48547 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.62■□□□□ 0.89
KCNC1P48547 AC142381.2-201ENST00000566120 298 ntBASIC20.62■□□□□ 0.89
KCNC1P48547 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNC1P48547 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNC1P48547 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNC1P48547 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNC1P48547 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNC1P48547 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.62■□□□□ 0.89
KCNC1P48547 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.61■□□□□ 0.89
KCNC1P48547 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KCNC1P48547 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KCNC1P48547 AC073130.3-201ENST00000624389 2278 ntBASIC20.61■□□□□ 0.89
KCNC1P48547 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
KCNC1P48547 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.61■□□□□ 0.89
KCNC1P48547 AC012414.1-201ENST00000556676 535 ntBASIC20.61■□□□□ 0.89
KCNC1P48547 AC005837.3-201ENST00000612163 286 ntBASIC20.61■□□□□ 0.89
KCNC1P48547 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNC1P48547 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.61■□□□□ 0.89
KCNC1P48547 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.61■□□□□ 0.89
KCNC1P48547 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNC1P48547 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KCNC1P48547 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNC1P48547 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNC1P48547 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.6■□□□□ 0.89
KCNC1P48547 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.6■□□□□ 0.89
KCNC1P48547 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.6■□□□□ 0.89
KCNC1P48547 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNC1P48547 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.6■□□□□ 0.89
KCNC1P48547 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KCNC1P48547 PLK5-205ENST00000642079 1969 ntBASIC20.6■□□□□ 0.89
KCNC1P48547 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNC1P48547 MIR638-201ENST00000385237 100 ntBASIC20.6■□□□□ 0.89
KCNC1P48547 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNC1P48547 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNC1P48547 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.6■□□□□ 0.89
KCNC1P48547 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KCNC1P48547 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNC1P48547 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
KCNC1P48547 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
KCNC1P48547 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KCNC1P48547 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
KCNC1P48547 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.59■□□□□ 0.89
KCNC1P48547 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
KCNC1P48547 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNC1P48547 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.59■□□□□ 0.89
KCNC1P48547 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.59■□□□□ 0.89
KCNC1P48547 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNC1P48547 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNC1P48547 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNC1P48547 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KCNC1P48547 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.58■□□□□ 0.89
KCNC1P48547 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
KCNC1P48547 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KCNC1P48547 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNC1P48547 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KCNC1P48547 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.58■□□□□ 0.89
KCNC1P48547 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.58■□□□□ 0.89
KCNC1P48547 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.58■□□□□ 0.89
KCNC1P48547 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KCNC1P48547 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.58■□□□□ 0.88
KCNC1P48547 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KCNC1P48547 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KCNC1P48547 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
KCNC1P48547 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNC1P48547 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNC1P48547 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.57■□□□□ 0.88
KCNC1P48547 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.57■□□□□ 0.88
KCNC1P48547 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNC1P48547 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.57■□□□□ 0.88
KCNC1P48547 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNC1P48547 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNC1P48547 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms