Protein–RNA interactions for Protein: P47100

TY1B-JR2, Transposon Ty1-JR2 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR2P47100 PAC1YOR269W 1485 nt2.34□□□□□ -2.03
TY1B-JR2P47100 MEC1YBR136W 7107 nt2.34□□□□□ -2.04
TY1B-JR2P47100 CDC60YPL160W 3273 nt2.34□□□□□ -2.04
TY1B-JR2P47100 HMO1YDR174W 741 nt2.33□□□□□ -2.04
TY1B-JR2P47100 TMA22YJR014W 597 nt2.33□□□□□ -2.04
TY1B-JR2P47100 YNL165WYNL165W 1221 nt2.33□□□□□ -2.04
TY1B-JR2P47100 ROY1YMR258C 1662 nt2.33□□□□□ -2.04
TY1B-JR2P47100 CPR5YDR304C 678 nt2.33□□□□□ -2.04
TY1B-JR2P47100 YOR146WYOR146W 306 nt2.33□□□□□ -2.04
TY1B-JR2P47100 PGS1YCL004W 1566 nt2.33□□□□□ -2.04
TY1B-JR2P47100 RNY1YPL123C 1305 nt2.32□□□□□ -2.04
TY1B-JR2P47100 PHO13YDL236W 939 nt2.32□□□□□ -2.04
TY1B-JR2P47100 ENV10YLR065C 546 nt2.32□□□□□ -2.04
TY1B-JR2P47100 SSF1YHR066W 1362 nt2.32□□□□□ -2.04
TY1B-JR2P47100 COG4YPR105C 2586 nt2.32□□□□□ -2.04
TY1B-JR2P47100 MED2YDL005C 1296 nt2.31□□□□□ -2.04
TY1B-JR2P47100 AIM23YJL131C 1071 nt2.31□□□□□ -2.04
TY1B-JR2P47100 YJR111CYJR111C 852 nt2.31□□□□□ -2.04
TY1B-JR2P47100 DID4YKL002W 699 nt2.31□□□□□ -2.04
TY1B-JR2P47100 NSE1YLR007W 1011 nt2.31□□□□□ -2.04
TY1B-JR2P47100 RPS30BYOR182C 192 nt2.31□□□□□ -2.04
TY1B-JR2P47100 HSL1YKL101W 4557 nt2.31□□□□□ -2.04
TY1B-JR2P47100 TRA1YHR099W 11235 nt2.31□□□□□ -2.04
TY1B-JR2P47100 DNF3YMR162C 4971 nt2.31□□□□□ -2.04
TY1B-JR2P47100 YGL176CYGL176C 1665 nt2.31□□□□□ -2.04
TY1B-JR2P47100 GEA2YEL022W 4380 nt2.3□□□□□ -2.04
TY1B-JR2P47100 PHS1YJL097W 654 nt2.3□□□□□ -2.04
TY1B-JR2P47100 ISW1YBR245C 3390 nt2.3□□□□□ -2.04
TY1B-JR2P47100 YNL144CYNL144C 2223 nt2.3□□□□□ -2.04
TY1B-JR2P47100 SWC4YGR002C 1431 nt2.29□□□□□ -2.04
TY1B-JR2P47100 COQ9YLR201C 783 nt2.29□□□□□ -2.04
TY1B-JR2P47100 SEC65YML105C 822 nt2.29□□□□□ -2.04
TY1B-JR2P47100 PHO2YDL106C 1680 nt2.29□□□□□ -2.04
TY1B-JR2P47100 SMI1YGR229C 1518 nt2.29□□□□□ -2.04
TY1B-JR2P47100 RRI1YDL216C 1323 nt2.29□□□□□ -2.04
TY1B-JR2P47100 YDR261W-BYDR261W-B 5313 nt2.29□□□□□ -2.04
TY1B-JR2P47100 NOP14YDL148C 2433 nt2.28□□□□□ -2.04
TY1B-JR2P47100 HMT1YBR034C 1047 nt2.28□□□□□ -2.04
TY1B-JR2P47100 PDR8YLR266C 2106 nt2.28□□□□□ -2.04
TY1B-JR2P47100 YLR419WYLR419W 4308 nt2.28□□□□□ -2.04
TY1B-JR2P47100 SMX2YFL017W-A 234 nt2.28□□□□□ -2.04
TY1B-JR2P47100 RPS1AYLR441C 768 nt2.28□□□□□ -2.04
TY1B-JR2P47100 ATP11YNL315C 957 nt2.28□□□□□ -2.04
TY1B-JR2P47100 CPR8YNR028W 927 nt2.28□□□□□ -2.04
TY1B-JR2P47100 HUA2YOR284W 732 nt2.28□□□□□ -2.04
TY1B-JR2P47100 YPR027CYPR027C 834 nt2.28□□□□□ -2.04
TY1B-JR2P47100 TOR2YKL203C 7425 nt2.28□□□□□ -2.04
TY1B-JR2P47100 CWC22YGR278W 1734 nt2.27□□□□□ -2.05
TY1B-JR2P47100 SOK2YMR016C 2358 nt2.27□□□□□ -2.05
TY1B-JR2P47100 OKP1YGR179C 1221 nt2.27□□□□□ -2.05
TY1B-JR2P47100 YOL057WYOL057W 2136 nt2.27□□□□□ -2.05
TY1B-JR2P47100 MDM10YAL010C 1482 nt2.27□□□□□ -2.05
TY1B-JR2P47100 PAU2YEL049W 363 nt2.26□□□□□ -2.05
TY1B-JR2P47100 PAU12YGR294W 363 nt2.26□□□□□ -2.05
TY1B-JR2P47100 RSM25YIL093C 795 nt2.26□□□□□ -2.05
TY1B-JR2P47100 PAU18YLL064C 363 nt2.26□□□□□ -2.05
TY1B-JR2P47100 PAU6YNR076W 363 nt2.26□□□□□ -2.05
TY1B-JR2P47100 PAU24YBR301W 363 nt2.26□□□□□ -2.05
TY1B-JR2P47100 HDA2YDR295C 2025 nt2.26□□□□□ -2.05
TY1B-JR2P47100 UTP21YLR409C 2820 nt2.26□□□□□ -2.05
TY1B-JR2P47100 TRZ1YKR079C 2517 nt2.26□□□□□ -2.05
TY1B-JR2P47100 TRX1YLR043C 312 nt2.26□□□□□ -2.05
TY1B-JR2P47100 YDR210W-BYDR210W-B 5313 nt2.25□□□□□ -2.05
TY1B-JR2P47100 YML094C-AYML094C-A 402 nt2.25□□□□□ -2.05
TY1B-JR2P47100 ATG34YOL083W 1239 nt2.25□□□□□ -2.05
TY1B-JR2P47100 POC4YPL144W 447 nt2.25□□□□□ -2.05
TY1B-JR2P47100 LDB17YDL146W 1476 nt2.25□□□□□ -2.05
TY1B-JR2P47100 CSF1YLR087C 8877 nt2.25□□□□□ -2.05
TY1B-JR2P47100 LAP3YNL239W 1365 nt2.24□□□□□ -2.05
TY1B-JR2P47100 YJR056CYJR056C 711 nt2.24□□□□□ -2.05
TY1B-JR2P47100 REC102YLR329W 795 nt2.24□□□□□ -2.05
TY1B-JR2P47100 CTF13YMR094W 1437 nt2.24□□□□□ -2.05
TY1B-JR2P47100 NAN1YPL126W 2691 nt2.24□□□□□ -2.05
TY1B-JR2P47100 GNT1YOR320C 1476 nt2.24□□□□□ -2.05
TY1B-JR2P47100 LSM1YJL124C 519 nt2.23□□□□□ -2.05
TY1B-JR2P47100 MAK10YEL053C 2202 nt2.23□□□□□ -2.05
TY1B-JR2P47100 PHO12YHR215W 1404 nt2.23□□□□□ -2.05
TY1B-JR2P47100 PHO11YAR071W 1404 nt2.23□□□□□ -2.05
TY1B-JR2P47100 TOP1YOL006C 2310 nt2.23□□□□□ -2.05
TY1B-JR2P47100 GPP2YER062C 753 nt2.22□□□□□ -2.05
TY1B-JR2P47100 YGR293CYGR293C 462 nt2.22□□□□□ -2.05
TY1B-JR2P47100 HHF2YNL030W 312 nt2.22□□□□□ -2.05
TY1B-JR2P47100 SWD3YBR175W 948 nt2.22□□□□□ -2.05
TY1B-JR2P47100 RRP7YCL031C 894 nt2.22□□□□□ -2.05
TY1B-JR2P47100 MSM1YGR171C 1728 nt2.22□□□□□ -2.05
TY1B-JR2P47100 SIR3YLR442C 2937 nt2.21□□□□□ -2.06
TY1B-JR2P47100 PRP6YBR055C 2700 nt2.21□□□□□ -2.06
TY1B-JR2P47100 TMA64YDR117C 1698 nt2.21□□□□□ -2.06
TY1B-JR2P47100 MSH5YDL154W 2706 nt2.21□□□□□ -2.06
TY1B-JR2P47100 FIN1YDR130C 876 nt2.21□□□□□ -2.06
TY1B-JR2P47100 NNT1YLR285W 786 nt2.21□□□□□ -2.06
TY1B-JR2P47100 CSH1YBR161W 1131 nt2.21□□□□□ -2.06
TY1B-JR2P47100 IRE1YHR079C 3348 nt2.2□□□□□ -2.06
TY1B-JR2P47100 NRP1YDL167C 2160 nt2.2□□□□□ -2.06
TY1B-JR2P47100 RIM13YMR154C 2184 nt2.2□□□□□ -2.06
TY1B-JR2P47100 VBA4YDR119W 2307 nt2.2□□□□□ -2.06
TY1B-JR2P47100 SWA2YDR320C 2007 nt2.2□□□□□ -2.06
TY1B-JR2P47100 SDP1YIL113W 630 nt2.2□□□□□ -2.06
TY1B-JR2P47100 BNI1YNL271C 5862 nt2.19□□□□□ -2.06
TY1B-JR2P47100 CFT2YLR115W 2580 nt2.19□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 70.8 ms