Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 tF(GAA)NtF(GAA)N 73 nt2.2□□□□□ -2.06
LSM1P47017 RPL19BYBL027W 570 nt2.2□□□□□ -2.06
LSM1P47017 SUB1YMR039C 879 nt2.2□□□□□ -2.06
LSM1P47017 CAF20YOR276W 486 nt2.2□□□□□ -2.06
LSM1P47017 POL30YBR088C 777 nt2.2□□□□□ -2.06
LSM1P47017 TIM12YBR091C 330 nt2.2□□□□□ -2.06
LSM1P47017 YOR365CYOR365C 2112 nt2.2□□□□□ -2.06
LSM1P47017 MRPL6YHR147C 645 nt2.19□□□□□ -2.06
LSM1P47017 YKL066WYKL066W 444 nt2.19□□□□□ -2.06
LSM1P47017 EBP2YKL172W 1284 nt2.19□□□□□ -2.06
LSM1P47017 SDO1YLR022C 753 nt2.19□□□□□ -2.06
LSM1P47017 LTO1YNL260C 597 nt2.19□□□□□ -2.06
LSM1P47017 YOR097CYOR097C 528 nt2.19□□□□□ -2.06
LSM1P47017 HAT1YPL001W 1125 nt2.19□□□□□ -2.06
LSM1P47017 KSP1YHR082C 3090 nt2.19□□□□□ -2.06
LSM1P47017 TRM12YML005W 1389 nt2.19□□□□□ -2.06
LSM1P47017 MSS4YDR208W 2340 nt2.19□□□□□ -2.06
LSM1P47017 ROY1YMR258C 1662 nt2.18□□□□□ -2.06
LSM1P47017 SEN54YPL083C 1404 nt2.18□□□□□ -2.06
LSM1P47017 HBT1YDL223C 3141 nt2.18□□□□□ -2.06
LSM1P47017 LRS4YDR439W 1044 nt2.18□□□□□ -2.06
LSM1P47017 YGR168CYGR168C 1131 nt2.18□□□□□ -2.06
LSM1P47017 TFA2YKR062W 987 nt2.18□□□□□ -2.06
LSM1P47017 YLR012CYLR012C 300 nt2.18□□□□□ -2.06
LSM1P47017 YOL166CYOL166C 339 nt2.18□□□□□ -2.06
LSM1P47017 YOR055WYOR055W 435 nt2.18□□□□□ -2.06
LSM1P47017 YPL035CYPL035C 348 nt2.18□□□□□ -2.06
LSM1P47017 SUR1YPL057C 1149 nt2.18□□□□□ -2.06
LSM1P47017 ACA1YER045C 1470 nt2.18□□□□□ -2.06
LSM1P47017 MUM3YOR298W 1440 nt2.17□□□□□ -2.06
LSM1P47017 IRC8YJL051W 2469 nt2.17□□□□□ -2.06
LSM1P47017 YIL092WYIL092W 1902 nt2.17□□□□□ -2.06
LSM1P47017 SSD1YDR293C 3753 nt2.17□□□□□ -2.06
LSM1P47017 RNR2YJL026W 1200 nt2.17□□□□□ -2.06
LSM1P47017 SPC3YLR066W 555 nt2.17□□□□□ -2.06
LSM1P47017 MBA1YBR185C 837 nt2.17□□□□□ -2.06
LSM1P47017 YKL075CYKL075C 1353 nt2.17□□□□□ -2.06
LSM1P47017 ATP22YDR350C 2055 nt2.17□□□□□ -2.06
LSM1P47017 YNL018CYNL018C 1839 nt2.17□□□□□ -2.06
LSM1P47017 RSE1YML049C 4086 nt2.16□□□□□ -2.06
LSM1P47017 RRP42YDL111C 798 nt2.16□□□□□ -2.06
LSM1P47017 YDR090CYDR090C 933 nt2.16□□□□□ -2.06
LSM1P47017 TIM11YDR322C-A 291 nt2.16□□□□□ -2.06
LSM1P47017 YGR050CYGR050C 357 nt2.16□□□□□ -2.06
LSM1P47017 SFH5YJL145W 885 nt2.16□□□□□ -2.06
LSM1P47017 ILV5YLR355C 1188 nt2.16□□□□□ -2.06
LSM1P47017 USO1YDL058W 5373 nt2.16□□□□□ -2.06
LSM1P47017 IRA2YOL081W 9240 nt2.16□□□□□ -2.06
LSM1P47017 SCD5YOR329C 2619 nt2.15□□□□□ -2.06
LSM1P47017 YDR179W-AYDR179W-A 1392 nt2.15□□□□□ -2.07
LSM1P47017 HER2YMR293C 1395 nt2.15□□□□□ -2.07
LSM1P47017 SHU2YDR078C 672 nt2.15□□□□□ -2.07
LSM1P47017 RPL27BYDR471W 411 nt2.15□□□□□ -2.07
LSM1P47017 BOS1YLR078C 735 nt2.15□□□□□ -2.07
LSM1P47017 ALG14YBR070C 714 nt2.15□□□□□ -2.07
LSM1P47017 RGA1YOR127W 3024 nt2.15□□□□□ -2.07
LSM1P47017 STN1YDR082W 1485 nt2.14□□□□□ -2.07
LSM1P47017 TAE2YPL009C 3117 nt2.14□□□□□ -2.07
LSM1P47017 YIL068W-AYIL068W-A 384 nt2.14□□□□□ -2.07
LSM1P47017 YOR050CYOR050C 348 nt2.14□□□□□ -2.07
LSM1P47017 RFM1YOR279C 933 nt2.14□□□□□ -2.07
LSM1P47017 YPR078CYPR078C 1119 nt2.14□□□□□ -2.07
LSM1P47017 VPS64YDR200C 1815 nt2.14□□□□□ -2.07
LSM1P47017 FKS3YMR306W 5358 nt2.13□□□□□ -2.07
LSM1P47017 YBR259WYBR259W 2067 nt2.13□□□□□ -2.07
LSM1P47017 YPR097WYPR097W 3222 nt2.13□□□□□ -2.07
LSM1P47017 YDR222WYDR222W 1248 nt2.13□□□□□ -2.07
LSM1P47017 SCL1YGL011C 759 nt2.13□□□□□ -2.07
LSM1P47017 YGR149WYGR149W 1299 nt2.13□□□□□ -2.07
LSM1P47017 PEX21YGR239C 867 nt2.13□□□□□ -2.07
LSM1P47017 YHR097CYHR097C 1101 nt2.13□□□□□ -2.07
LSM1P47017 YAL042C-AYAL042C-A 378 nt2.13□□□□□ -2.07
LSM1P47017 RPL8BYLL045C 771 nt2.13□□□□□ -2.07
LSM1P47017 AIM32YML050W 936 nt2.13□□□□□ -2.07
LSM1P47017 YOL114CYOL114C 609 nt2.13□□□□□ -2.07
LSM1P47017 EXO70YJL085W 1872 nt2.13□□□□□ -2.07
LSM1P47017 HMS1YOR032C 1305 nt2.13□□□□□ -2.07
LSM1P47017 CLB5YPR120C 1308 nt2.13□□□□□ -2.07
LSM1P47017 AGE1YDR524C 1449 nt2.12□□□□□ -2.07
LSM1P47017 ERG25YGR060W 930 nt2.12□□□□□ -2.07
LSM1P47017 GTT1YIR038C 705 nt2.12□□□□□ -2.07
LSM1P47017 YKL033W-AYKL033W-A 711 nt2.12□□□□□ -2.07
LSM1P47017 COX14YML129C 213 nt2.12□□□□□ -2.07
LSM1P47017 YMR320WYMR320W 306 nt2.12□□□□□ -2.07
LSM1P47017 FPR1YNL135C 345 nt2.12□□□□□ -2.07
LSM1P47017 TPT1YOL102C 693 nt2.12□□□□□ -2.07
LSM1P47017 YOR283WYOR283W 693 nt2.12□□□□□ -2.07
LSM1P47017 HMT1YBR034C 1047 nt2.12□□□□□ -2.07
LSM1P47017 ISU1YPL135W 498 nt2.12□□□□□ -2.07
LSM1P47017 YJL132WYJL132W 2253 nt2.12□□□□□ -2.07
LSM1P47017 YLR108CYLR108C 1458 nt2.12□□□□□ -2.07
LSM1P47017 UBX3YDL091C 1368 nt2.11□□□□□ -2.07
LSM1P47017 YMR1YJR110W 2067 nt2.11□□□□□ -2.07
LSM1P47017 SMC6YLR383W 3345 nt2.11□□□□□ -2.07
LSM1P47017 HSC82YMR186W 2118 nt2.11□□□□□ -2.07
LSM1P47017 RGL1YPL066W 1440 nt2.11□□□□□ -2.07
LSM1P47017 NOP19YGR251W 591 nt2.11□□□□□ -2.07
LSM1P47017 UTP30YKR060W 825 nt2.11□□□□□ -2.07
LSM1P47017 PDR11YIL013C 4236 nt2.11□□□□□ -2.07
LSM1P47017 YRR1YOR162C 2433 nt2.11□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 25.8 ms