Protein–RNA interactions for Protein: P40567

MSL1, U2 small nuclear ribonucleoprotein B'', yeastyeast

Predicted RBP Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSL1P40567 VMA10YHR039C-A 345 nt1.57□□□□□ -2.16
MSL1P40567 RPC17YJL011C 486 nt1.57□□□□□ -2.16
MSL1P40567 COS5YJR161C 1152 nt1.57□□□□□ -2.16
MSL1P40567 YAL042C-AYAL042C-A 378 nt1.57□□□□□ -2.16
MSL1P40567 YOR062CYOR062C 807 nt1.57□□□□□ -2.16
MSL1P40567 UBR1YGR184C 5853 nt1.57□□□□□ -2.16
MSL1P40567 DBP10YDL031W 2988 nt1.57□□□□□ -2.16
MSL1P40567 BOI1YBL085W 2943 nt1.56□□□□□ -2.16
MSL1P40567 YMR1YJR110W 2067 nt1.56□□□□□ -2.16
MSL1P40567 RNH70YGR276C 1662 nt1.56□□□□□ -2.16
MSL1P40567 GAT2YMR136W 1683 nt1.56□□□□□ -2.16
MSL1P40567 PCL9YDL179W 915 nt1.56□□□□□ -2.16
MSL1P40567 SDT1YGL224C 843 nt1.56□□□□□ -2.16
MSL1P40567 AIM19YIL087C 474 nt1.56□□□□□ -2.16
MSL1P40567 PAU8YAL068C 363 nt1.56□□□□□ -2.16
MSL1P40567 DUG3YNL191W 1074 nt1.56□□□□□ -2.16
MSL1P40567 PAU20YOL161C 363 nt1.56□□□□□ -2.16
MSL1P40567 MUD1YBR119W 897 nt1.56□□□□□ -2.16
MSL1P40567 KAR4YCL055W 1008 nt1.56□□□□□ -2.16
MSL1P40567 MYO2YOR326W 4725 nt1.56□□□□□ -2.16
MSL1P40567 PUT3YKL015W 2940 nt1.56□□□□□ -2.16
MSL1P40567 RED1YLR263W 2484 nt1.55□□□□□ -2.16
MSL1P40567 BSC2YDR275W 708 nt1.55□□□□□ -2.16
MSL1P40567 YDR340WYDR340W 303 nt1.55□□□□□ -2.16
MSL1P40567 RPB9YGL070C 369 nt1.55□□□□□ -2.16
MSL1P40567 SPO74YGL170C 1242 nt1.55□□□□□ -2.16
MSL1P40567 YGR149WYGR149W 1299 nt1.55□□□□□ -2.16
MSL1P40567 tT(UGU)HtT(UGU)H 72 nt1.55□□□□□ -2.16
MSL1P40567 YKL162CYKL162C 1209 nt1.55□□□□□ -2.16
MSL1P40567 ERD2YBL040C 660 nt1.55□□□□□ -2.16
MSL1P40567 MET16YPR167C 786 nt1.55□□□□□ -2.16
MSL1P40567 ITT1YML068W 1395 nt1.55□□□□□ -2.16
MSL1P40567 SET2YJL168C 2202 nt1.55□□□□□ -2.16
MSL1P40567 YLR035C-AYLR035C-A 3468 nt1.54□□□□□ -2.16
MSL1P40567 MIG2YGL209W 1149 nt1.54□□□□□ -2.16
MSL1P40567 YPS5YGL259W 498 nt1.54□□□□□ -2.16
MSL1P40567 tW(CCA)G1tW(CCA)G1 72 nt1.54□□□□□ -2.16
MSL1P40567 tW(CCA)G2tW(CCA)G2 72 nt1.54□□□□□ -2.16
MSL1P40567 tW(CCA)JtW(CCA)J 72 nt1.54□□□□□ -2.16
MSL1P40567 tW(CCA)KtW(CCA)K 72 nt1.54□□□□□ -2.16
MSL1P40567 tW(CCA)MtW(CCA)M 72 nt1.54□□□□□ -2.16
MSL1P40567 tW(CCA)PtW(CCA)P 72 nt1.54□□□□□ -2.16
MSL1P40567 YLR012CYLR012C 300 nt1.54□□□□□ -2.16
MSL1P40567 YBL029WYBL029W 1131 nt1.54□□□□□ -2.16
MSL1P40567 YNL143CYNL143C 393 nt1.54□□□□□ -2.16
MSL1P40567 REG2YBR050C 1017 nt1.54□□□□□ -2.16
MSL1P40567 UTP5YDR398W 1932 nt1.53□□□□□ -2.16
MSL1P40567 GDI1YER136W 1356 nt1.53□□□□□ -2.16
MSL1P40567 SAP190YKR028W 3102 nt1.53□□□□□ -2.16
MSL1P40567 YKR075CYKR075C 924 nt1.53□□□□□ -2.16
MSL1P40567 RPS17AYML024W 411 nt1.53□□□□□ -2.16
MSL1P40567 YNL035CYNL035C 1170 nt1.53□□□□□ -2.16
MSL1P40567 YOR263CYOR263C 408 nt1.53□□□□□ -2.16
MSL1P40567 MF(ALPHA)1YPL187W 498 nt1.53□□□□□ -2.16
MSL1P40567 RSA1YPL193W 1146 nt1.53□□□□□ -2.16
MSL1P40567 ISA2YPR067W 558 nt1.53□□□□□ -2.16
MSL1P40567 YBR096WYBR096W 693 nt1.53□□□□□ -2.16
MSL1P40567 UTP22YGR090W 3714 nt1.53□□□□□ -2.17
MSL1P40567 PSP1YDR505C 2526 nt1.52□□□□□ -2.17
MSL1P40567 GIP3YPL137C 3831 nt1.52□□□□□ -2.17
MSL1P40567 NUP100YKL068W 2880 nt1.52□□□□□ -2.17
MSL1P40567 SRO9YCL037C 1305 nt1.52□□□□□ -2.17
MSL1P40567 GRX3YDR098C 858 nt1.52□□□□□ -2.17
MSL1P40567 TWF1YGR080W 999 nt1.52□□□□□ -2.17
MSL1P40567 SDO1YLR022C 753 nt1.52□□□□□ -2.17
MSL1P40567 HOS4YIL112W 3252 nt1.52□□□□□ -2.17
MSL1P40567 FRE8YLR047C 2061 nt1.52□□□□□ -2.17
MSL1P40567 PIN4YBL051C 2007 nt1.51□□□□□ -2.17
MSL1P40567 YCR081C-AYCR081C-A 237 nt1.51□□□□□ -2.17
MSL1P40567 GCN4YEL009C 846 nt1.51□□□□□ -2.17
MSL1P40567 COX13YGL191W 390 nt1.51□□□□□ -2.17
MSL1P40567 YLR154W-AYLR154W-A 186 nt1.51□□□□□ -2.17
MSL1P40567 YLR224WYLR224W 1110 nt1.51□□□□□ -2.17
MSL1P40567 21S_rRNA21S_rRNA 3296 nt1.51□□□□□ -2.17
MSL1P40567 MSH4YFL003C 2637 nt1.51□□□□□ -2.17
MSL1P40567 SSE1YPL106C 2082 nt1.51□□□□□ -2.17
MSL1P40567 VPS15YBR097W 4365 nt1.5□□□□□ -2.17
MSL1P40567 MUS81YDR386W 1899 nt1.5□□□□□ -2.17
MSL1P40567 YDR203WYDR203W 318 nt1.5□□□□□ -2.17
MSL1P40567 IRC6YFR043C 714 nt1.5□□□□□ -2.17
MSL1P40567 YHR069C-AYHR069C-A 363 nt1.5□□□□□ -2.17
MSL1P40567 LSM8YJR022W 330 nt1.5□□□□□ -2.17
MSL1P40567 EMC6YLL014W 327 nt1.5□□□□□ -2.17
MSL1P40567 RPL8BYLL045C 771 nt1.5□□□□□ -2.17
MSL1P40567 CDC123YLR215C 1083 nt1.5□□□□□ -2.17
MSL1P40567 SSQ1YLR369W 1974 nt1.5□□□□□ -2.17
MSL1P40567 PEP1YBL017C 4740 nt1.5□□□□□ -2.17
MSL1P40567 SMC6YLR383W 3345 nt1.5□□□□□ -2.17
MSL1P40567 MYO4YAL029C 4416 nt1.5□□□□□ -2.17
MSL1P40567 RTP1YMR185W 2946 nt1.5□□□□□ -2.17
MSL1P40567 UTP6YDR449C 1323 nt1.49□□□□□ -2.17
MSL1P40567 HMO1YDR174W 741 nt1.49□□□□□ -2.17
MSL1P40567 TIM11YDR322C-A 291 nt1.49□□□□□ -2.17
MSL1P40567 PCL5YHR071W 690 nt1.49□□□□□ -2.17
MSL1P40567 YJL211CYJL211C 444 nt1.49□□□□□ -2.17
MSL1P40567 CSE4YKL049C 690 nt1.49□□□□□ -2.17
MSL1P40567 SRL3YKR091W 741 nt1.49□□□□□ -2.17
MSL1P40567 URA5YML106W 681 nt1.49□□□□□ -2.17
MSL1P40567 COX14YML129C 213 nt1.49□□□□□ -2.17
MSL1P40567 FPR1YNL135C 345 nt1.49□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 18 ms