Protein–RNA interactions for Protein: P38959

VPS41, Vacuolar protein sorting-associated protein 41, yeastyeast

Predictions only

Length 992 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS41P38959 RUF22RUF22 515 nt3.55□□□□□ -1.84
VPS41P38959 YPL135C-AYPL135C-A 174 nt3.55□□□□□ -1.84
VPS41P38959 YPR078CYPR078C 1119 nt3.55□□□□□ -1.84
VPS41P38959 SRP1YNL189W 1629 nt3.55□□□□□ -1.84
VPS41P38959 UBX3YDL091C 1368 nt3.54□□□□□ -1.84
VPS41P38959 MFB1YDR219C 1398 nt3.54□□□□□ -1.84
VPS41P38959 LTV1YKL143W 1392 nt3.54□□□□□ -1.84
VPS41P38959 RDS2YPL133C 1341 nt3.54□□□□□ -1.84
VPS41P38959 FRE4YNR060W 2160 nt3.54□□□□□ -1.84
VPS41P38959 RPS23AYGR118W 438 nt3.54□□□□□ -1.84
VPS41P38959 GIC1YHR061C 945 nt3.54□□□□□ -1.84
VPS41P38959 CFD1YIL003W 882 nt3.54□□□□□ -1.84
VPS41P38959 ATG27YJL178C 816 nt3.54□□□□□ -1.84
VPS41P38959 TMA19YKL056C 504 nt3.54□□□□□ -1.84
VPS41P38959 IRC21YMR073C 606 nt3.54□□□□□ -1.84
VPS41P38959 RLP7YNL002C 969 nt3.54□□□□□ -1.84
VPS41P38959 YOL013W-BYOL013W-B 291 nt3.54□□□□□ -1.84
VPS41P38959 RPS23BYPR132W 438 nt3.54□□□□□ -1.84
VPS41P38959 RVS161YCR009C 798 nt3.53□□□□□ -1.84
VPS41P38959 PMI40YER003C 1290 nt3.53□□□□□ -1.84
VPS41P38959 YJR020WYJR020W 333 nt3.53□□□□□ -1.84
VPS41P38959 FLD1YLR404W 858 nt3.53□□□□□ -1.84
VPS41P38959 TUM1YOR251C 915 nt3.53□□□□□ -1.84
VPS41P38959 SLY41YOR307C 1362 nt3.52□□□□□ -1.85
VPS41P38959 YDL176WYDL176W 2127 nt3.52□□□□□ -1.85
VPS41P38959 CHK1YBR274W 1584 nt3.52□□□□□ -1.85
VPS41P38959 YGR293CYGR293C 462 nt3.52□□□□□ -1.85
VPS41P38959 YIR040CYIR040C 333 nt3.52□□□□□ -1.85
VPS41P38959 YMR087WYMR087W 855 nt3.52□□□□□ -1.85
VPS41P38959 OCA2YNL056W 594 nt3.52□□□□□ -1.85
VPS41P38959 PET123YOR158W 957 nt3.52□□□□□ -1.85
VPS41P38959 YBR300CYBR300C 498 nt3.52□□□□□ -1.85
VPS41P38959 TCB3YML072C 4638 nt3.52□□□□□ -1.85
VPS41P38959 VPS17YOR132W 1656 nt3.52□□□□□ -1.85
VPS41P38959 GYP6YJL044C 1377 nt3.51□□□□□ -1.85
VPS41P38959 YDR170W-AYDR170W-A 1323 nt3.51□□□□□ -1.85
VPS41P38959 YMR046CYMR046C 1323 nt3.51□□□□□ -1.85
VPS41P38959 ESA1YOR244W 1338 nt3.51□□□□□ -1.85
VPS41P38959 MSM1YGR171C 1728 nt3.51□□□□□ -1.85
VPS41P38959 snR56snR56 88 nt3.51□□□□□ -1.85
VPS41P38959 snR84snR84 550 nt3.51□□□□□ -1.85
VPS41P38959 YDR461C-AYDR461C-A 243 nt3.51□□□□□ -1.85
VPS41P38959 VMA21YGR105W 234 nt3.51□□□□□ -1.85
VPS41P38959 SCEIQ0160 708 nt3.51□□□□□ -1.85
VPS41P38959 YJR141WYJR141W 1044 nt3.51□□□□□ -1.85
VPS41P38959 PBA1YLR199C 831 nt3.51□□□□□ -1.85
VPS41P38959 YLR416CYLR416C 399 nt3.51□□□□□ -1.85
VPS41P38959 ASI2YNL159C 870 nt3.51□□□□□ -1.85
VPS41P38959 RET3YPL010W 570 nt3.51□□□□□ -1.85
VPS41P38959 POL2YNL262W 6669 nt3.51□□□□□ -1.85
VPS41P38959 NDC80YIL144W 2076 nt3.51□□□□□ -1.85
VPS41P38959 ENA2YDR039C 3276 nt3.51□□□□□ -1.85
VPS41P38959 ENA1YDR040C 3276 nt3.51□□□□□ -1.85
VPS41P38959 BCH1YMR237W 2175 nt3.51□□□□□ -1.85
VPS41P38959 YDR179W-AYDR179W-A 1392 nt3.51□□□□□ -1.85
VPS41P38959 DOA4YDR069C 2781 nt3.5□□□□□ -1.85
VPS41P38959 PKP2YGL059W 1476 nt3.5□□□□□ -1.85
VPS41P38959 IOC3YFR013W 2364 nt3.5□□□□□ -1.85
VPS41P38959 AAD3YCR107W 1092 nt3.5□□□□□ -1.85
VPS41P38959 LRS4YDR439W 1044 nt3.5□□□□□ -1.85
VPS41P38959 SEC4YFL005W 648 nt3.5□□□□□ -1.85
VPS41P38959 THG1YGR024C 714 nt3.5□□□□□ -1.85
VPS41P38959 TAM41YGR046W 1158 nt3.5□□□□□ -1.85
VPS41P38959 COX18YGR062C 951 nt3.5□□□□□ -1.85
VPS41P38959 YKL115CYKL115C 393 nt3.5□□□□□ -1.85
VPS41P38959 ATG10YLL042C 504 nt3.5□□□□□ -1.85
VPS41P38959 OST6YML019W 999 nt3.5□□□□□ -1.85
VPS41P38959 TSR4YOL022C 1227 nt3.5□□□□□ -1.85
VPS41P38959 CMD1YBR109C 444 nt3.5□□□□□ -1.85
VPS41P38959 YJL049WYJL049W 1353 nt3.5□□□□□ -1.85
VPS41P38959 EMP70YLR083C 2004 nt3.49□□□□□ -1.85
VPS41P38959 GIS4YML006C 2325 nt3.49□□□□□ -1.85
VPS41P38959 DRS2YAL026C 4068 nt3.49□□□□□ -1.85
VPS41P38959 MSR1YHR091C 1932 nt3.49□□□□□ -1.85
VPS41P38959 NSE4YDL105W 1209 nt3.49□□□□□ -1.85
VPS41P38959 GPP2YER062C 753 nt3.49□□□□□ -1.85
VPS41P38959 EPT1YHR123W 1176 nt3.49□□□□□ -1.85
VPS41P38959 RGI2YIL057C 495 nt3.49□□□□□ -1.85
VPS41P38959 YIL175WYIL175W 318 nt3.49□□□□□ -1.85
VPS41P38959 YJL222W-BYJL222W-B 138 nt3.49□□□□□ -1.85
VPS41P38959 IME1YJR094C 1083 nt3.49□□□□□ -1.85
VPS41P38959 YJR157WYJR157W 363 nt3.49□□□□□ -1.85
VPS41P38959 YKL023C-AYKL023C-A 228 nt3.49□□□□□ -1.85
VPS41P38959 YLR154C-HYLR154C-H 132 nt3.49□□□□□ -1.85
VPS41P38959 YLR156C-AYLR156C-A 132 nt3.49□□□□□ -1.85
VPS41P38959 YLR157C-CYLR157C-C 132 nt3.49□□□□□ -1.85
VPS41P38959 YLR159C-AYLR159C-A 132 nt3.49□□□□□ -1.85
VPS41P38959 RDN58-1RDN58-1 158 nt3.49□□□□□ -1.85
VPS41P38959 RDN58-2RDN58-2 158 nt3.49□□□□□ -1.85
VPS41P38959 GIM5YML094W 492 nt3.49□□□□□ -1.85
VPS41P38959 YMR254CYMR254C 309 nt3.49□□□□□ -1.85
VPS41P38959 MEI5YPL121C 669 nt3.49□□□□□ -1.85
VPS41P38959 YPR136CYPR136C 513 nt3.49□□□□□ -1.85
VPS41P38959 MRH4YGL064C 1686 nt3.49□□□□□ -1.85
VPS41P38959 YDL180WYDL180W 1644 nt3.48□□□□□ -1.85
VPS41P38959 TRM82YDR165W 1335 nt3.48□□□□□ -1.85
VPS41P38959 KIN3YAR018C 1308 nt3.48□□□□□ -1.85
VPS41P38959 YAT2YER024W 2772 nt3.48□□□□□ -1.85
VPS41P38959 JEN1YKL217W 1851 nt3.48□□□□□ -1.85
VPS41P38959 YCR085WYCR085W 354 nt3.48□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 18.3 ms