Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLCN1P35523 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLCN1P35523 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLCN1P35523 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLCN1P35523 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.84■■□□□ 1.41
CLCN1P35523 KRT16P3-201ENST00000439127 1283 ntBASIC23.84■■□□□ 1.41
CLCN1P35523 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
CLCN1P35523 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLCN1P35523 LINC01529-204ENST00000636474 1715 ntBASIC23.84■■□□□ 1.41
CLCN1P35523 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLCN1P35523 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.83■■□□□ 1.41
CLCN1P35523 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
CLCN1P35523 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.83■■□□□ 1.41
CLCN1P35523 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CLCN1P35523 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CLCN1P35523 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.83■■□□□ 1.41
CLCN1P35523 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CLCN1P35523 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
CLCN1P35523 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CLCN1P35523 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.83■■□□□ 1.4
CLCN1P35523 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.83■■□□□ 1.4
CLCN1P35523 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCN1P35523 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCN1P35523 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCN1P35523 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC23.82■■□□□ 1.4
CLCN1P35523 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC23.82■■□□□ 1.4
CLCN1P35523 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.82■■□□□ 1.4
CLCN1P35523 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.82■■□□□ 1.4
CLCN1P35523 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCN1P35523 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CLCN1P35523 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CLCN1P35523 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CLCN1P35523 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
CLCN1P35523 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCN1P35523 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLCN1P35523 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
CLCN1P35523 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.81■■□□□ 1.4
CLCN1P35523 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.81■■□□□ 1.4
CLCN1P35523 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.81■■□□□ 1.4
CLCN1P35523 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLCN1P35523 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC23.81■■□□□ 1.4
CLCN1P35523 C17orf82-201ENST00000623772 1530 ntBASIC23.81■■□□□ 1.4
CLCN1P35523 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLCN1P35523 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.81■■□□□ 1.4
CLCN1P35523 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CLCN1P35523 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLCN1P35523 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.81■■□□□ 1.4
CLCN1P35523 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN1P35523 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN1P35523 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.8■■□□□ 1.4
CLCN1P35523 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN1P35523 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CLCN1P35523 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN1P35523 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.8■■□□□ 1.4
CLCN1P35523 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CLCN1P35523 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN1P35523 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN1P35523 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.8■■□□□ 1.4
CLCN1P35523 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
CLCN1P35523 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN1P35523 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.8■■□□□ 1.4
CLCN1P35523 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.8■■□□□ 1.4
CLCN1P35523 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN1P35523 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN1P35523 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN1P35523 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN1P35523 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CLCN1P35523 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN1P35523 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN1P35523 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC23.79■■□□□ 1.4
CLCN1P35523 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.79■■□□□ 1.4
CLCN1P35523 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.79■■□□□ 1.4
CLCN1P35523 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN1P35523 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN1P35523 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN1P35523 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.79■■□□□ 1.4
CLCN1P35523 DUX4L4-201ENST00000566884 1269 ntBASIC23.79■■□□□ 1.4
CLCN1P35523 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN1P35523 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CLCN1P35523 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CLCN1P35523 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN1P35523 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN1P35523 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN1P35523 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN1P35523 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC23.78■■□□□ 1.4
CLCN1P35523 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLCN1P35523 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CLCN1P35523 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.78■■□□□ 1.4
CLCN1P35523 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
CLCN1P35523 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLCN1P35523 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CLCN1P35523 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLCN1P35523 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLCN1P35523 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLCN1P35523 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.78■■□□□ 1.4
CLCN1P35523 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CLCN1P35523 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CLCN1P35523 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLCN1P35523 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLCN1P35523 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms