Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.23■□□□□ 0.67
SHC1P29353 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.23■□□□□ 0.67
SHC1P29353 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.23■□□□□ 0.67
SHC1P29353 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.23■□□□□ 0.67
SHC1P29353 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SHC1P29353 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHC1P29353 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHC1P29353 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SHC1P29353 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SHC1P29353 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.23■□□□□ 0.67
SHC1P29353 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
SHC1P29353 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC1P29353 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHC1P29353 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC1P29353 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC1P29353 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SHC1P29353 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC1P29353 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SHC1P29353 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHC1P29353 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC1P29353 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHC1P29353 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHC1P29353 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.22■□□□□ 0.67
SHC1P29353 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.22■□□□□ 0.67
SHC1P29353 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.22■□□□□ 0.67
SHC1P29353 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC1P29353 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC1P29353 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHC1P29353 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC1P29353 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SHC1P29353 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SHC1P29353 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHC1P29353 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHC1P29353 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHC1P29353 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHC1P29353 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.21■□□□□ 0.67
SHC1P29353 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.21■□□□□ 0.67
SHC1P29353 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.21■□□□□ 0.67
SHC1P29353 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.21■□□□□ 0.67
SHC1P29353 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHC1P29353 KRT18P61-201ENST00000585825 1298 ntBASIC19.21■□□□□ 0.67
SHC1P29353 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.21■□□□□ 0.67
SHC1P29353 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHC1P29353 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.21■□□□□ 0.67
SHC1P29353 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHC1P29353 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.2■□□□□ 0.66
SHC1P29353 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC1P29353 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC1P29353 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC1P29353 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SHC1P29353 AC003102.1-202ENST00000563394 1796 ntBASIC19.2■□□□□ 0.66
SHC1P29353 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC1P29353 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.2■□□□□ 0.66
SHC1P29353 AC034268.1-201ENST00000441047 882 ntBASIC19.2■□□□□ 0.66
SHC1P29353 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
SHC1P29353 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC1P29353 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SHC1P29353 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.2■□□□□ 0.66
SHC1P29353 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.2■□□□□ 0.66
SHC1P29353 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC1P29353 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC1P29353 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC1P29353 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC1P29353 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC1P29353 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC1P29353 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC1P29353 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
SHC1P29353 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.19■□□□□ 0.66
SHC1P29353 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SHC1P29353 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.19■□□□□ 0.66
SHC1P29353 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SHC1P29353 AC079140.4-201ENST00000507448 529 ntBASIC19.19■□□□□ 0.66
SHC1P29353 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC1P29353 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SHC1P29353 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.19■□□□□ 0.66
SHC1P29353 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
SHC1P29353 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.19■□□□□ 0.66
SHC1P29353 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC1P29353 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC1P29353 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SHC1P29353 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC1P29353 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SHC1P29353 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SHC1P29353 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.18■□□□□ 0.66
SHC1P29353 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SHC1P29353 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.18■□□□□ 0.66
SHC1P29353 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC1P29353 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC1P29353 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC1P29353 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
SHC1P29353 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.18■□□□□ 0.66
SHC1P29353 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.18■□□□□ 0.66
SHC1P29353 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHC1P29353 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.18■□□□□ 0.66
SHC1P29353 MIR5787-201ENST00000611784 55 ntBASIC19.18■□□□□ 0.66
SHC1P29353 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC1P29353 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.18■□□□□ 0.66
SHC1P29353 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC1P29353 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHC1P29353 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms