Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 GABARAPL3-202ENST00000624044 1851 ntBASIC20.42■□□□□ 0.86
EPHA3P29320 AC092171.4-201ENST00000609130 632 ntBASIC20.42■□□□□ 0.86
EPHA3P29320 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.42■□□□□ 0.86
EPHA3P29320 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.42■□□□□ 0.86
EPHA3P29320 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA3P29320 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA3P29320 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
EPHA3P29320 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA3P29320 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA3P29320 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA3P29320 PCDHAC2-203ENST00000615316 3011 ntBASIC20.42■□□□□ 0.86
EPHA3P29320 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA3P29320 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA3P29320 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA3P29320 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA3P29320 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHA3P29320 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.41■□□□□ 0.86
EPHA3P29320 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EPHA3P29320 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
EPHA3P29320 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.41■□□□□ 0.86
EPHA3P29320 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHA3P29320 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.41■□□□□ 0.86
EPHA3P29320 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EPHA3P29320 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.41■□□□□ 0.86
EPHA3P29320 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EPHA3P29320 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EPHA3P29320 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
EPHA3P29320 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHA3P29320 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHA3P29320 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EPHA3P29320 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHA3P29320 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
EPHA3P29320 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHA3P29320 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHA3P29320 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.4■□□□□ 0.86
EPHA3P29320 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.4■□□□□ 0.86
EPHA3P29320 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHA3P29320 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
EPHA3P29320 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.4■□□□□ 0.86
EPHA3P29320 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.4■□□□□ 0.86
EPHA3P29320 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.4■□□□□ 0.86
EPHA3P29320 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHA3P29320 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.39■□□□□ 0.86
EPHA3P29320 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
EPHA3P29320 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
EPHA3P29320 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
EPHA3P29320 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
EPHA3P29320 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
EPHA3P29320 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
EPHA3P29320 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EPHA3P29320 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
EPHA3P29320 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
EPHA3P29320 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.39■□□□□ 0.85
EPHA3P29320 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
EPHA3P29320 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
EPHA3P29320 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
EPHA3P29320 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
EPHA3P29320 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EPHA3P29320 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.39■□□□□ 0.85
EPHA3P29320 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EPHA3P29320 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA3P29320 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.38■□□□□ 0.85
EPHA3P29320 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA3P29320 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.38■□□□□ 0.85
EPHA3P29320 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA3P29320 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA3P29320 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA3P29320 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.38■□□□□ 0.85
EPHA3P29320 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA3P29320 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA3P29320 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA3P29320 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA3P29320 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA3P29320 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA3P29320 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA3P29320 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
EPHA3P29320 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.38■□□□□ 0.85
EPHA3P29320 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.38■□□□□ 0.85
EPHA3P29320 AL512631.2-201ENST00000604634 923 ntBASIC20.38■□□□□ 0.85
EPHA3P29320 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.38■□□□□ 0.85
EPHA3P29320 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA3P29320 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA3P29320 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.38■□□□□ 0.85
EPHA3P29320 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.38■□□□□ 0.85
EPHA3P29320 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA3P29320 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
EPHA3P29320 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA3P29320 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EPHA3P29320 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
EPHA3P29320 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
EPHA3P29320 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EPHA3P29320 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EPHA3P29320 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EPHA3P29320 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
EPHA3P29320 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.37■□□□□ 0.85
EPHA3P29320 SERBP1P1-201ENST00000396021 1160 ntBASIC20.37■□□□□ 0.85
EPHA3P29320 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
EPHA3P29320 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EPHA3P29320 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EPHA3P29320 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms