Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VARSP26640 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VARSP26640 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VARSP26640 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VARSP26640 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VARSP26640 Z98882.1-201ENST00000622160 2253 ntBASIC20.58■□□□□ 0.89
VARSP26640 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
VARSP26640 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VARSP26640 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.58■□□□□ 0.89
VARSP26640 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.58■□□□□ 0.89
VARSP26640 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.58■□□□□ 0.89
VARSP26640 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.58■□□□□ 0.89
VARSP26640 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.58■□□□□ 0.88
VARSP26640 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VARSP26640 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.58■□□□□ 0.88
VARSP26640 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VARSP26640 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VARSP26640 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.58■□□□□ 0.88
VARSP26640 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
VARSP26640 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.57■□□□□ 0.88
VARSP26640 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VARSP26640 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
VARSP26640 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
VARSP26640 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.57■□□□□ 0.88
VARSP26640 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VARSP26640 AC012414.1-201ENST00000556676 535 ntBASIC20.57■□□□□ 0.88
VARSP26640 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.57■□□□□ 0.88
VARSP26640 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VARSP26640 MIR6084-201ENST00000622012 110 ntBASIC20.57■□□□□ 0.88
VARSP26640 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.57■□□□□ 0.88
VARSP26640 AF106564.1-201ENST00000607058 2553 ntBASIC20.57■□□□□ 0.88
VARSP26640 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VARSP26640 BX005040.4-201ENST00000637145 1518 ntBASIC20.57■□□□□ 0.88
VARSP26640 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
VARSP26640 AC003102.1-202ENST00000563394 1796 ntBASIC20.57■□□□□ 0.88
VARSP26640 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
VARSP26640 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VARSP26640 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VARSP26640 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VARSP26640 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VARSP26640 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.56■□□□□ 0.88
VARSP26640 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.56■□□□□ 0.88
VARSP26640 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VARSP26640 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VARSP26640 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VARSP26640 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.56■□□□□ 0.88
VARSP26640 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.56■□□□□ 0.88
VARSP26640 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VARSP26640 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VARSP26640 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VARSP26640 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
VARSP26640 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.56■□□□□ 0.88
VARSP26640 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.56■□□□□ 0.88
VARSP26640 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.56■□□□□ 0.88
VARSP26640 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VARSP26640 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.56■□□□□ 0.88
VARSP26640 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.55■□□□□ 0.88
VARSP26640 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.55■□□□□ 0.88
VARSP26640 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VARSP26640 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
VARSP26640 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VARSP26640 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VARSP26640 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VARSP26640 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VARSP26640 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
VARSP26640 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VARSP26640 AC027612.3-201ENST00000413684 1047 ntBASIC20.55■□□□□ 0.88
VARSP26640 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.55■□□□□ 0.88
VARSP26640 KRT18P5-201ENST00000436075 1291 ntBASIC20.55■□□□□ 0.88
VARSP26640 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
VARSP26640 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
VARSP26640 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
VARSP26640 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VARSP26640 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VARSP26640 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.54■□□□□ 0.88
VARSP26640 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
VARSP26640 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VARSP26640 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VARSP26640 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VARSP26640 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VARSP26640 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.54■□□□□ 0.88
VARSP26640 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VARSP26640 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VARSP26640 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
VARSP26640 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.54■□□□□ 0.88
VARSP26640 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
VARSP26640 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.54■□□□□ 0.88
VARSP26640 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.54■□□□□ 0.88
VARSP26640 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.54■□□□□ 0.88
VARSP26640 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VARSP26640 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.54■□□□□ 0.88
VARSP26640 AC009237.3-201ENST00000393279 1427 ntBASIC20.53■□□□□ 0.88
VARSP26640 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.53■□□□□ 0.88
VARSP26640 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.53■□□□□ 0.88
VARSP26640 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VARSP26640 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VARSP26640 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.53■□□□□ 0.88
VARSP26640 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.53■□□□□ 0.88
VARSP26640 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.53■□□□□ 0.88
VARSP26640 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms