Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.67■□□□□ 0.9
SDHBP21912 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.67■□□□□ 0.9
SDHBP21912 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SDHBP21912 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SDHBP21912 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SDHBP21912 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SDHBP21912 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SDHBP21912 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SDHBP21912 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SDHBP21912 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
SDHBP21912 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SDHBP21912 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.66■□□□□ 0.9
SDHBP21912 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SDHBP21912 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.66■□□□□ 0.9
SDHBP21912 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SDHBP21912 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.66■□□□□ 0.9
SDHBP21912 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SDHBP21912 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.66■□□□□ 0.9
SDHBP21912 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SDHBP21912 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
SDHBP21912 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.66■□□□□ 0.9
SDHBP21912 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SDHBP21912 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.65■□□□□ 0.9
SDHBP21912 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SDHBP21912 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SDHBP21912 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SDHBP21912 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.65■□□□□ 0.9
SDHBP21912 AL049597.2-201ENST00000565575 961 ntBASIC20.65■□□□□ 0.9
SDHBP21912 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SDHBP21912 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SDHBP21912 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.64■□□□□ 0.9
SDHBP21912 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SDHBP21912 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SDHBP21912 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SDHBP21912 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SDHBP21912 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SDHBP21912 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SDHBP21912 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SDHBP21912 TSPY7P-201ENST00000431358 1114 ntBASIC20.64■□□□□ 0.89
SDHBP21912 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SDHBP21912 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
SDHBP21912 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.64■□□□□ 0.89
SDHBP21912 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.64■□□□□ 0.89
SDHBP21912 PNMA6B-201ENST00000538162 1200 ntBASIC20.64■□□□□ 0.89
SDHBP21912 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.64■□□□□ 0.89
SDHBP21912 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.64■□□□□ 0.89
SDHBP21912 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SDHBP21912 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SDHBP21912 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SDHBP21912 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.64■□□□□ 0.89
SDHBP21912 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.64■□□□□ 0.89
SDHBP21912 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SDHBP21912 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SDHBP21912 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.63■□□□□ 0.89
SDHBP21912 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SDHBP21912 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SDHBP21912 POU5F1P4-201ENST00000413175 1085 ntBASIC20.63■□□□□ 0.89
SDHBP21912 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.63■□□□□ 0.89
SDHBP21912 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.63■□□□□ 0.89
SDHBP21912 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SDHBP21912 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SDHBP21912 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SDHBP21912 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SDHBP21912 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDHBP21912 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SDHBP21912 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SDHBP21912 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDHBP21912 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.62■□□□□ 0.89
SDHBP21912 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SDHBP21912 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.62■□□□□ 0.89
SDHBP21912 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.62■□□□□ 0.89
SDHBP21912 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDHBP21912 AC069544.1-201ENST00000609399 999 ntBASIC20.62■□□□□ 0.89
SDHBP21912 AL049637.2-201ENST00000641778 930 ntBASIC20.62■□□□□ 0.89
SDHBP21912 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SDHBP21912 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SDHBP21912 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDHBP21912 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SDHBP21912 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDHBP21912 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
SDHBP21912 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SDHBP21912 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDHBP21912 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.61■□□□□ 0.89
SDHBP21912 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.61■□□□□ 0.89
SDHBP21912 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.61■□□□□ 0.89
SDHBP21912 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.61■□□□□ 0.89
SDHBP21912 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SDHBP21912 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDHBP21912 AC068473.5-201ENST00000616428 2072 ntBASIC20.61■□□□□ 0.89
SDHBP21912 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHBP21912 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHBP21912 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SDHBP21912 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHBP21912 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHBP21912 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SDHBP21912 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SDHBP21912 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHBP21912 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SDHBP21912 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.6■□□□□ 0.89
SDHBP21912 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms