Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT4P19013 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
KRT4P19013 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT4P19013 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT4P19013 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.06■□□□□ 0.96
KRT4P19013 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.06■□□□□ 0.96
KRT4P19013 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.06■□□□□ 0.96
KRT4P19013 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
KRT4P19013 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT4P19013 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.06■□□□□ 0.96
KRT4P19013 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT4P19013 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT4P19013 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.06■□□□□ 0.96
KRT4P19013 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
KRT4P19013 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT4P19013 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT4P19013 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT4P19013 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT4P19013 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
KRT4P19013 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.05■□□□□ 0.96
KRT4P19013 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.05■□□□□ 0.96
KRT4P19013 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT4P19013 AL391422.3-201ENST00000603791 2761 ntBASIC21.05■□□□□ 0.96
KRT4P19013 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT4P19013 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT4P19013 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KRT4P19013 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT4P19013 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT4P19013 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.05■□□□□ 0.96
KRT4P19013 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT4P19013 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT4P19013 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT4P19013 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT4P19013 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT4P19013 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
KRT4P19013 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
KRT4P19013 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT4P19013 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT4P19013 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT4P19013 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT4P19013 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT4P19013 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.04■□□□□ 0.96
KRT4P19013 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT4P19013 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT4P19013 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.04■□□□□ 0.96
KRT4P19013 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT4P19013 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT4P19013 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
KRT4P19013 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
KRT4P19013 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT4P19013 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT4P19013 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT4P19013 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
KRT4P19013 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT4P19013 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT4P19013 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
KRT4P19013 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
KRT4P19013 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.03■□□□□ 0.96
KRT4P19013 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT4P19013 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT4P19013 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT4P19013 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT4P19013 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.03■□□□□ 0.96
KRT4P19013 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT4P19013 PCDHAC2-203ENST00000615316 3011 ntBASIC21.03■□□□□ 0.96
KRT4P19013 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT4P19013 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KRT4P19013 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT4P19013 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT4P19013 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT4P19013 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT4P19013 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.03■□□□□ 0.96
KRT4P19013 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.02■□□□□ 0.96
KRT4P19013 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.02■□□□□ 0.96
KRT4P19013 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT4P19013 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT4P19013 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.02■□□□□ 0.96
KRT4P19013 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KRT4P19013 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.02■□□□□ 0.96
KRT4P19013 KRT16P3-201ENST00000439127 1283 ntBASIC21.02■□□□□ 0.96
KRT4P19013 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.02■□□□□ 0.96
KRT4P19013 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.02■□□□□ 0.96
KRT4P19013 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.02■□□□□ 0.96
KRT4P19013 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
KRT4P19013 AP006587.3-201ENST00000525742 1516 ntBASIC21.02■□□□□ 0.96
KRT4P19013 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
KRT4P19013 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
KRT4P19013 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
KRT4P19013 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
KRT4P19013 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
KRT4P19013 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT4P19013 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT4P19013 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT4P19013 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT4P19013 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT4P19013 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT4P19013 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
KRT4P19013 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT4P19013 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT4P19013 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms