Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VCLP18206 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VCLP18206 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VCLP18206 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VCLP18206 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VCLP18206 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.07■□□□□ 0.96
VCLP18206 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.07■□□□□ 0.96
VCLP18206 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VCLP18206 AC079140.4-201ENST00000507448 529 ntBASIC21.07■□□□□ 0.96
VCLP18206 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.07■□□□□ 0.96
VCLP18206 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
VCLP18206 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.07■□□□□ 0.96
VCLP18206 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VCLP18206 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VCLP18206 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VCLP18206 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VCLP18206 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
VCLP18206 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.07■□□□□ 0.96
VCLP18206 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VCLP18206 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VCLP18206 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VCLP18206 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.06■□□□□ 0.96
VCLP18206 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VCLP18206 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VCLP18206 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VCLP18206 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.06■□□□□ 0.96
VCLP18206 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VCLP18206 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.06■□□□□ 0.96
VCLP18206 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.06■□□□□ 0.96
VCLP18206 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
VCLP18206 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VCLP18206 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VCLP18206 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VCLP18206 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VCLP18206 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VCLP18206 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.06■□□□□ 0.96
VCLP18206 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.05■□□□□ 0.96
VCLP18206 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VCLP18206 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.05■□□□□ 0.96
VCLP18206 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VCLP18206 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
VCLP18206 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VCLP18206 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
VCLP18206 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.05■□□□□ 0.96
VCLP18206 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.05■□□□□ 0.96
VCLP18206 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.05■□□□□ 0.96
VCLP18206 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.05■□□□□ 0.96
VCLP18206 AC010542.4-201ENST00000563151 1910 ntBASIC21.05■□□□□ 0.96
VCLP18206 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.05■□□□□ 0.96
VCLP18206 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.05■□□□□ 0.96
VCLP18206 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VCLP18206 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.04■□□□□ 0.96
VCLP18206 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
VCLP18206 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
VCLP18206 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VCLP18206 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.04■□□□□ 0.96
VCLP18206 AC104564.3-201ENST00000582367 638 ntBASIC21.04■□□□□ 0.96
VCLP18206 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VCLP18206 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
VCLP18206 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.04■□□□□ 0.96
VCLP18206 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.04■□□□□ 0.96
VCLP18206 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VCLP18206 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VCLP18206 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
VCLP18206 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
VCLP18206 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VCLP18206 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
VCLP18206 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VCLP18206 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VCLP18206 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.03■□□□□ 0.96
VCLP18206 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VCLP18206 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
VCLP18206 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.03■□□□□ 0.96
VCLP18206 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.03■□□□□ 0.96
VCLP18206 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.03■□□□□ 0.96
VCLP18206 NTF6G-201ENST00000591094 616 ntBASIC21.03■□□□□ 0.96
VCLP18206 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
VCLP18206 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VCLP18206 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.03■□□□□ 0.96
VCLP18206 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.03■□□□□ 0.96
VCLP18206 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VCLP18206 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
VCLP18206 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
VCLP18206 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.03■□□□□ 0.96
VCLP18206 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VCLP18206 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
VCLP18206 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VCLP18206 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VCLP18206 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VCLP18206 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VCLP18206 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
VCLP18206 KRT18P5-201ENST00000436075 1291 ntBASIC21.02■□□□□ 0.96
VCLP18206 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VCLP18206 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.02■□□□□ 0.96
VCLP18206 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.02■□□□□ 0.96
VCLP18206 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
VCLP18206 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.02■□□□□ 0.95
VCLP18206 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
VCLP18206 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
VCLP18206 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms