Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.42■□□□□ 0.38
ACANP16112 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ACANP16112 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ACANP16112 HLA-B-256ENST00000639848 1089 ntBASIC17.42■□□□□ 0.38
ACANP16112 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ACANP16112 OR7E47P-201ENST00000546390 1422 ntBASIC17.42■□□□□ 0.38
ACANP16112 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.42■□□□□ 0.38
ACANP16112 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACANP16112 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACANP16112 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
ACANP16112 MTDHP1-201ENST00000605323 784 ntBASIC17.41■□□□□ 0.38
ACANP16112 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
ACANP16112 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.41■□□□□ 0.38
ACANP16112 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.41■□□□□ 0.38
ACANP16112 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.41■□□□□ 0.38
ACANP16112 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACANP16112 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.41■□□□□ 0.38
ACANP16112 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.41■□□□□ 0.38
ACANP16112 AP001412.1-201ENST00000608405 714 ntBASIC17.41■□□□□ 0.38
ACANP16112 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ACANP16112 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACANP16112 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACANP16112 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACANP16112 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ACANP16112 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACANP16112 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ACANP16112 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.4■□□□□ 0.38
ACANP16112 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.4■□□□□ 0.38
ACANP16112 AC120498.10-201ENST00000621827 505 ntBASIC17.4■□□□□ 0.38
ACANP16112 AC092865.7-201ENST00000641832 219 ntBASIC17.4■□□□□ 0.38
ACANP16112 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACANP16112 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACANP16112 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ACANP16112 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACANP16112 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ACANP16112 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACANP16112 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ACANP16112 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ACANP16112 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACANP16112 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ACANP16112 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.4■□□□□ 0.38
ACANP16112 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
ACANP16112 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ACANP16112 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ACANP16112 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ACANP16112 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
ACANP16112 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
ACANP16112 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.39■□□□□ 0.37
ACANP16112 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.39■□□□□ 0.37
ACANP16112 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.39■□□□□ 0.37
ACANP16112 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
ACANP16112 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.39■□□□□ 0.37
ACANP16112 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.39■□□□□ 0.37
ACANP16112 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ACANP16112 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ACANP16112 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ACANP16112 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ACANP16112 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ACANP16112 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ACANP16112 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ACANP16112 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ACANP16112 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ACANP16112 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ACANP16112 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.39■□□□□ 0.37
ACANP16112 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
ACANP16112 AC133681.1-201ENST00000465482 601 ntBASIC17.39■□□□□ 0.37
ACANP16112 AL049597.2-201ENST00000565575 961 ntBASIC17.39■□□□□ 0.37
ACANP16112 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.39■□□□□ 0.37
ACANP16112 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.39■□□□□ 0.37
ACANP16112 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.39■□□□□ 0.37
ACANP16112 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.39■□□□□ 0.37
ACANP16112 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACANP16112 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.38■□□□□ 0.37
ACANP16112 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.38■□□□□ 0.37
ACANP16112 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ACANP16112 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACANP16112 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACANP16112 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACANP16112 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.38■□□□□ 0.37
ACANP16112 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.38■□□□□ 0.37
ACANP16112 AL034346.1-201ENST00000568244 1277 ntBASIC17.38■□□□□ 0.37
ACANP16112 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.38■□□□□ 0.37
ACANP16112 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.38■□□□□ 0.37
ACANP16112 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.38■□□□□ 0.37
ACANP16112 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACANP16112 LINC00526-201ENST00000581067 1875 ntBASIC17.38■□□□□ 0.37
ACANP16112 AL139125.2-201ENST00000623134 1869 ntBASIC17.38■□□□□ 0.37
ACANP16112 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ACANP16112 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ACANP16112 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACANP16112 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.38■□□□□ 0.37
ACANP16112 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
ACANP16112 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.38■□□□□ 0.37
ACANP16112 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACANP16112 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ACANP16112 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ACANP16112 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACANP16112 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.37■□□□□ 0.37
ACANP16112 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.37■□□□□ 0.37
ACANP16112 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms