Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PF4V1P10720 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PF4V1P10720 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PF4V1P10720 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PF4V1P10720 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PF4V1P10720 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PF4V1P10720 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PF4V1P10720 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PF4V1P10720 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.62■□□□□ 0.25
PF4V1P10720 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PF4V1P10720 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PF4V1P10720 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PF4V1P10720 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PF4V1P10720 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PF4V1P10720 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.62■□□□□ 0.25
PF4V1P10720 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.62■□□□□ 0.25
PF4V1P10720 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.62■□□□□ 0.25
PF4V1P10720 AC104187.1-201ENST00000607510 612 ntBASIC16.62■□□□□ 0.25
PF4V1P10720 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
PF4V1P10720 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PF4V1P10720 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
PF4V1P10720 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
PF4V1P10720 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PF4V1P10720 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PF4V1P10720 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PF4V1P10720 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PF4V1P10720 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PF4V1P10720 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PF4V1P10720 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PF4V1P10720 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PF4V1P10720 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PF4V1P10720 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PF4V1P10720 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
PF4V1P10720 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PF4V1P10720 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PF4V1P10720 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PF4V1P10720 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PF4V1P10720 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PF4V1P10720 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.61■□□□□ 0.25
PF4V1P10720 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PF4V1P10720 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.61■□□□□ 0.25
PF4V1P10720 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PF4V1P10720 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.61■□□□□ 0.25
PF4V1P10720 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PF4V1P10720 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PF4V1P10720 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PF4V1P10720 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PF4V1P10720 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PF4V1P10720 MIR663A-201ENST00000385250 93 ntBASIC16.6■□□□□ 0.25
PF4V1P10720 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.6■□□□□ 0.25
PF4V1P10720 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PF4V1P10720 C11orf96-202ENST00000528572 1834 ntBASIC16.6■□□□□ 0.25
PF4V1P10720 EP400NL-214ENST00000641289 2402 ntBASIC16.6■□□□□ 0.25
PF4V1P10720 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PF4V1P10720 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.6■□□□□ 0.25
PF4V1P10720 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PF4V1P10720 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PF4V1P10720 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PF4V1P10720 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.6■□□□□ 0.25
PF4V1P10720 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PF4V1P10720 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PF4V1P10720 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PF4V1P10720 AC026471.6-201ENST00000622954 1905 ntBASIC16.59■□□□□ 0.25
PF4V1P10720 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PF4V1P10720 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.59■□□□□ 0.25
PF4V1P10720 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PF4V1P10720 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PF4V1P10720 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.59■□□□□ 0.25
PF4V1P10720 AL355802.2-201ENST00000402069 882 ntBASIC16.59■□□□□ 0.25
PF4V1P10720 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.59■□□□□ 0.25
PF4V1P10720 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.59■□□□□ 0.25
PF4V1P10720 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.59■□□□□ 0.25
PF4V1P10720 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.59■□□□□ 0.25
PF4V1P10720 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.59■□□□□ 0.25
PF4V1P10720 RAP2CP1-201ENST00000605103 478 ntBASIC16.59■□□□□ 0.25
PF4V1P10720 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.59■□□□□ 0.25
PF4V1P10720 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PF4V1P10720 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
PF4V1P10720 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PF4V1P10720 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PF4V1P10720 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PF4V1P10720 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PF4V1P10720 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PF4V1P10720 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.59■□□□□ 0.25
PF4V1P10720 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.58■□□□□ 0.25
PF4V1P10720 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PF4V1P10720 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PF4V1P10720 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
PF4V1P10720 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PF4V1P10720 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PF4V1P10720 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.58■□□□□ 0.24
PF4V1P10720 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PF4V1P10720 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.58■□□□□ 0.24
PF4V1P10720 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.58■□□□□ 0.24
PF4V1P10720 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.58■□□□□ 0.24
PF4V1P10720 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.58■□□□□ 0.24
PF4V1P10720 AL109923.1-201ENST00000618799 583 ntBASIC16.58■□□□□ 0.24
PF4V1P10720 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PF4V1P10720 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PF4V1P10720 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms