Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 YGL176CYGL176C 1665 nt2.4□□□□□ -2.03
TY2B-LR1P0C2J3 RNY1YPL123C 1305 nt2.4□□□□□ -2.03
TY2B-LR1P0C2J3 SSF1YHR066W 1362 nt2.4□□□□□ -2.03
TY2B-LR1P0C2J3 PHO2YDL106C 1680 nt2.39□□□□□ -2.03
TY2B-LR1P0C2J3 GEA2YEL022W 4380 nt2.39□□□□□ -2.03
TY2B-LR1P0C2J3 AIM23YJL131C 1071 nt2.39□□□□□ -2.03
TY2B-LR1P0C2J3 YOR146WYOR146W 306 nt2.39□□□□□ -2.03
TY2B-LR1P0C2J3 YRB30YGL164C 1323 nt2.39□□□□□ -2.03
TY2B-LR1P0C2J3 YDR261W-BYDR261W-B 5313 nt2.39□□□□□ -2.03
TY2B-LR1P0C2J3 MED2YDL005C 1296 nt2.38□□□□□ -2.03
TY2B-LR1P0C2J3 HMO1YDR174W 741 nt2.38□□□□□ -2.03
TY2B-LR1P0C2J3 YNL144CYNL144C 2223 nt2.38□□□□□ -2.03
TY2B-LR1P0C2J3 HSL1YKL101W 4557 nt2.38□□□□□ -2.03
TY2B-LR1P0C2J3 COG4YPR105C 2586 nt2.38□□□□□ -2.03
TY2B-LR1P0C2J3 TOR2YKL203C 7425 nt2.38□□□□□ -2.03
TY2B-LR1P0C2J3 RPS1AYLR441C 768 nt2.38□□□□□ -2.03
TY2B-LR1P0C2J3 DNF3YMR162C 4971 nt2.37□□□□□ -2.03
TY2B-LR1P0C2J3 MEC1YBR136W 7107 nt2.37□□□□□ -2.03
TY2B-LR1P0C2J3 SPR28YDR218C 1272 nt2.37□□□□□ -2.03
TY2B-LR1P0C2J3 YOR034C-AYOR034C-A 243 nt2.37□□□□□ -2.03
TY2B-LR1P0C2J3 LCB4YOR171C 1875 nt2.37□□□□□ -2.03
TY2B-LR1P0C2J3 ISW1YBR245C 3390 nt2.36□□□□□ -2.03
TY2B-LR1P0C2J3 PAU2YEL049W 363 nt2.36□□□□□ -2.03
TY2B-LR1P0C2J3 PAU12YGR294W 363 nt2.36□□□□□ -2.03
TY2B-LR1P0C2J3 PAU18YLL064C 363 nt2.36□□□□□ -2.03
TY2B-LR1P0C2J3 SPS18YNL204C 903 nt2.36□□□□□ -2.03
TY2B-LR1P0C2J3 PAU6YNR076W 363 nt2.36□□□□□ -2.03
TY2B-LR1P0C2J3 PAU24YBR301W 363 nt2.36□□□□□ -2.03
TY2B-LR1P0C2J3 SOK2YMR016C 2358 nt2.36□□□□□ -2.03
TY2B-LR1P0C2J3 YJU2YKL095W 837 nt2.36□□□□□ -2.03
TY2B-LR1P0C2J3 YLR419WYLR419W 4308 nt2.35□□□□□ -2.03
TY2B-LR1P0C2J3 MDM10YAL010C 1482 nt2.35□□□□□ -2.03
TY2B-LR1P0C2J3 NOP14YDL148C 2433 nt2.35□□□□□ -2.03
TY2B-LR1P0C2J3 YDR210W-BYDR210W-B 5313 nt2.35□□□□□ -2.03
TY2B-LR1P0C2J3 OKP1YGR179C 1221 nt2.35□□□□□ -2.03
TY2B-LR1P0C2J3 PDR8YLR266C 2106 nt2.35□□□□□ -2.03
TY2B-LR1P0C2J3 HUA2YOR284W 732 nt2.34□□□□□ -2.03
TY2B-LR1P0C2J3 YOL057WYOL057W 2136 nt2.34□□□□□ -2.03
TY2B-LR1P0C2J3 TRZ1YKR079C 2517 nt2.34□□□□□ -2.03
TY2B-LR1P0C2J3 GPP2YER062C 753 nt2.33□□□□□ -2.04
TY2B-LR1P0C2J3 TRX1YLR043C 312 nt2.33□□□□□ -2.04
TY2B-LR1P0C2J3 ATP11YNL315C 957 nt2.33□□□□□ -2.04
TY2B-LR1P0C2J3 snR37snR37 386 nt2.33□□□□□ -2.04
TY2B-LR1P0C2J3 PHO12YHR215W 1404 nt2.33□□□□□ -2.04
TY2B-LR1P0C2J3 PHO11YAR071W 1404 nt2.33□□□□□ -2.04
TY2B-LR1P0C2J3 TRA1YHR099W 11235 nt2.33□□□□□ -2.04
TY2B-LR1P0C2J3 YGR293CYGR293C 462 nt2.33□□□□□ -2.04
TY2B-LR1P0C2J3 ATG34YOL083W 1239 nt2.33□□□□□ -2.04
TY2B-LR1P0C2J3 HMT1YBR034C 1047 nt2.33□□□□□ -2.04
TY2B-LR1P0C2J3 SWD3YBR175W 948 nt2.33□□□□□ -2.04
TY2B-LR1P0C2J3 UTP21YLR409C 2820 nt2.32□□□□□ -2.04
TY2B-LR1P0C2J3 SRG1SRG1 551 nt2.32□□□□□ -2.04
TY2B-LR1P0C2J3 SMX2YFL017W-A 234 nt2.32□□□□□ -2.04
TY2B-LR1P0C2J3 SWC4YGR002C 1431 nt2.32□□□□□ -2.04
TY2B-LR1P0C2J3 COQ9YLR201C 783 nt2.32□□□□□ -2.04
TY2B-LR1P0C2J3 SEC65YML105C 822 nt2.32□□□□□ -2.04
TY2B-LR1P0C2J3 TMA64YDR117C 1698 nt2.32□□□□□ -2.04
TY2B-LR1P0C2J3 VBA4YDR119W 2307 nt2.32□□□□□ -2.04
TY2B-LR1P0C2J3 CTF13YMR094W 1437 nt2.31□□□□□ -2.04
TY2B-LR1P0C2J3 MAK10YEL053C 2202 nt2.31□□□□□ -2.04
TY2B-LR1P0C2J3 YJR056CYJR056C 711 nt2.31□□□□□ -2.04
TY2B-LR1P0C2J3 YPR027CYPR027C 834 nt2.31□□□□□ -2.04
TY2B-LR1P0C2J3 RRP7YCL031C 894 nt2.31□□□□□ -2.04
TY2B-LR1P0C2J3 NAN1YPL126W 2691 nt2.31□□□□□ -2.04
TY2B-LR1P0C2J3 RIM13YMR154C 2184 nt2.31□□□□□ -2.04
TY2B-LR1P0C2J3 YML094C-AYML094C-A 402 nt2.31□□□□□ -2.04
TY2B-LR1P0C2J3 CWC22YGR278W 1734 nt2.3□□□□□ -2.04
TY2B-LR1P0C2J3 GNT1YOR320C 1476 nt2.3□□□□□ -2.04
TY2B-LR1P0C2J3 YLR462WYLR462W 609 nt2.3□□□□□ -2.04
TY2B-LR1P0C2J3 MSH5YDL154W 2706 nt2.3□□□□□ -2.04
TY2B-LR1P0C2J3 NNT1YLR285W 786 nt2.29□□□□□ -2.04
TY2B-LR1P0C2J3 SIR3YLR442C 2937 nt2.29□□□□□ -2.04
TY2B-LR1P0C2J3 PRP6YBR055C 2700 nt2.29□□□□□ -2.04
TY2B-LR1P0C2J3 BNI1YNL271C 5862 nt2.29□□□□□ -2.04
TY2B-LR1P0C2J3 REC102YLR329W 795 nt2.28□□□□□ -2.04
TY2B-LR1P0C2J3 HHF2YNL030W 312 nt2.28□□□□□ -2.04
TY2B-LR1P0C2J3 YBR090CYBR090C 369 nt2.28□□□□□ -2.04
TY2B-LR1P0C2J3 YOR192C-BYOR192C-B 5313 nt2.28□□□□□ -2.05
TY2B-LR1P0C2J3 CSH1YBR161W 1131 nt2.27□□□□□ -2.05
TY2B-LR1P0C2J3 CFT2YLR115W 2580 nt2.27□□□□□ -2.05
TY2B-LR1P0C2J3 SWA2YDR320C 2007 nt2.27□□□□□ -2.05
TY2B-LR1P0C2J3 YBP1YBR216C 2025 nt2.27□□□□□ -2.05
TY2B-LR1P0C2J3 IRE1YHR079C 3348 nt2.26□□□□□ -2.05
TY2B-LR1P0C2J3 YBL096CYBL096C 309 nt2.26□□□□□ -2.05
TY2B-LR1P0C2J3 YJL113WYJL113W 4647 nt2.26□□□□□ -2.05
TY2B-LR1P0C2J3 YHR095WYHR095W 495 nt2.26□□□□□ -2.05
TY2B-LR1P0C2J3 IBD2YNL164C 1056 nt2.26□□□□□ -2.05
TY2B-LR1P0C2J3 SMI1YGR229C 1518 nt2.25□□□□□ -2.05
TY2B-LR1P0C2J3 YDR098C-BYDR098C-B 5268 nt2.25□□□□□ -2.05
TY2B-LR1P0C2J3 YDR210C-DYDR210C-D 5268 nt2.25□□□□□ -2.05
TY2B-LR1P0C2J3 YDR316W-BYDR316W-B 5268 nt2.25□□□□□ -2.05
TY2B-LR1P0C2J3 YDR365W-BYDR365W-B 5268 nt2.25□□□□□ -2.05
TY2B-LR1P0C2J3 YER138CYER138C 5268 nt2.25□□□□□ -2.05
TY2B-LR1P0C2J3 YER160CYER160C 5268 nt2.25□□□□□ -2.05
TY2B-LR1P0C2J3 YGR038C-BYGR038C-B 5268 nt2.25□□□□□ -2.05
TY2B-LR1P0C2J3 YGR161C-DYGR161C-D 5268 nt2.25□□□□□ -2.05
TY2B-LR1P0C2J3 YJR027WYJR027W 5268 nt2.25□□□□□ -2.05
TY2B-LR1P0C2J3 YLR157C-BYLR157C-B 5268 nt2.25□□□□□ -2.05
TY2B-LR1P0C2J3 YML039WYML039W 5268 nt2.25□□□□□ -2.05
TY2B-LR1P0C2J3 YML045WYML045W 5268 nt2.25□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 23.9 ms