Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CD74P04233 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD74P04233 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.68■□□□□ 0.42
CD74P04233 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD74P04233 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.68■□□□□ 0.42
CD74P04233 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.68■□□□□ 0.42
CD74P04233 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD74P04233 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD74P04233 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CD74P04233 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD74P04233 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CD74P04233 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.68■□□□□ 0.42
CD74P04233 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CD74P04233 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
CD74P04233 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD74P04233 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CD74P04233 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD74P04233 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD74P04233 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD74P04233 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CD74P04233 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD74P04233 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD74P04233 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.67■□□□□ 0.42
CD74P04233 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD74P04233 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD74P04233 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD74P04233 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.67■□□□□ 0.42
CD74P04233 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD74P04233 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CD74P04233 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.67■□□□□ 0.42
CD74P04233 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD74P04233 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.67■□□□□ 0.42
CD74P04233 AC010141.3-201ENST00000456659 717 ntBASIC17.67■□□□□ 0.42
CD74P04233 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD74P04233 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.67■□□□□ 0.42
CD74P04233 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CD74P04233 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD74P04233 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD74P04233 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD74P04233 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.67■□□□□ 0.42
CD74P04233 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CD74P04233 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.66■□□□□ 0.42
CD74P04233 AL162377.1-201ENST00000618844 1793 ntBASIC17.66■□□□□ 0.42
CD74P04233 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.66■□□□□ 0.42
CD74P04233 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD74P04233 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD74P04233 KRT8P33-201ENST00000508125 1423 ntBASIC17.66■□□□□ 0.42
CD74P04233 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD74P04233 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD74P04233 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.66■□□□□ 0.42
CD74P04233 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD74P04233 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD74P04233 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.66■□□□□ 0.42
CD74P04233 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.66■□□□□ 0.42
CD74P04233 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.66■□□□□ 0.42
CD74P04233 MTDHP2-201ENST00000601468 714 ntBASIC17.66■□□□□ 0.42
CD74P04233 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD74P04233 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CD74P04233 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.66■□□□□ 0.42
CD74P04233 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.66■□□□□ 0.42
CD74P04233 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CD74P04233 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD74P04233 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.66■□□□□ 0.42
CD74P04233 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD74P04233 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD74P04233 AC007225.1-201ENST00000566331 1836 ntBASIC17.65■□□□□ 0.42
CD74P04233 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD74P04233 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD74P04233 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.65■□□□□ 0.42
CD74P04233 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD74P04233 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD74P04233 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
CD74P04233 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.65■□□□□ 0.42
CD74P04233 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CD74P04233 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.65■□□□□ 0.42
CD74P04233 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.65■□□□□ 0.42
CD74P04233 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD74P04233 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.65■□□□□ 0.42
CD74P04233 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.65■□□□□ 0.42
CD74P04233 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD74P04233 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CD74P04233 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD74P04233 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
CD74P04233 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD74P04233 PCDHAC2-203ENST00000615316 3011 ntBASIC17.64■□□□□ 0.41
CD74P04233 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD74P04233 AC121338.2-201ENST00000622535 1744 ntBASIC17.64■□□□□ 0.41
CD74P04233 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CD74P04233 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.64■□□□□ 0.41
CD74P04233 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.64■□□□□ 0.41
CD74P04233 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD74P04233 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.64■□□□□ 0.41
CD74P04233 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.64■□□□□ 0.41
CD74P04233 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD74P04233 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.64■□□□□ 0.41
CD74P04233 OR2I1P-207ENST00000453522 948 ntBASIC17.64■□□□□ 0.41
CD74P04233 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD74P04233 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.64■□□□□ 0.41
CD74P04233 pRNA.6-201ENST00000610482 90 ntBASIC17.64■□□□□ 0.41
CD74P04233 pRNA.5-201ENST00000612139 90 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms