Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.83■□□□□ 0.6
HLA-DQA2P01906 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQA2P01906 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQA2P01906 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQA2P01906 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQA2P01906 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQA2P01906 AP006587.3-201ENST00000525742 1516 ntBASIC18.83■□□□□ 0.6
HLA-DQA2P01906 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
HLA-DQA2P01906 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
HLA-DQA2P01906 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQA2P01906 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQA2P01906 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQA2P01906 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQA2P01906 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQA2P01906 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQA2P01906 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQA2P01906 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQA2P01906 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQA2P01906 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.82■□□□□ 0.6
HLA-DQA2P01906 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQA2P01906 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 AC096631.2-201ENST00000436136 790 ntBASIC18.81■□□□□ 0.6
HLA-DQA2P01906 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 PBX2P1-201ENST00000493219 1291 ntBASIC18.81■□□□□ 0.6
HLA-DQA2P01906 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 SMUG1P1-201ENST00000590640 811 ntBASIC18.81■□□□□ 0.6
HLA-DQA2P01906 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQA2P01906 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQA2P01906 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQA2P01906 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HLA-DQA2P01906 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQA2P01906 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQA2P01906 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQA2P01906 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
HLA-DQA2P01906 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQA2P01906 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQA2P01906 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQA2P01906 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.8■□□□□ 0.6
HLA-DQA2P01906 IGHV3-19-201ENST00000521488 291 ntBASIC18.8■□□□□ 0.6
HLA-DQA2P01906 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DQA2P01906 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DQA2P01906 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DQA2P01906 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HLA-DQA2P01906 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQA2P01906 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DQA2P01906 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
HLA-DQA2P01906 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQA2P01906 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
HLA-DQA2P01906 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DQA2P01906 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQA2P01906 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.79■□□□□ 0.6
HLA-DQA2P01906 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQA2P01906 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
HLA-DQA2P01906 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQA2P01906 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQA2P01906 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQA2P01906 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQA2P01906 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DQA2P01906 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQA2P01906 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DQA2P01906 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQA2P01906 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.79■□□□□ 0.6
HLA-DQA2P01906 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQA2P01906 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HLA-DQA2P01906 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQA2P01906 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQA2P01906 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA2P01906 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA2P01906 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA2P01906 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA2P01906 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA2P01906 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA2P01906 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA2P01906 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA2P01906 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA2P01906 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA2P01906 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA2P01906 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HLA-DQA2P01906 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA2P01906 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA2P01906 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQA2P01906 AC099791.1-201ENST00000416440 715 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms